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Procedure providing SI-traceable results for the calibration of protein standards by sulfur determination and its application on tau
Quantitative proteomics is a growing research area and one of the most important tools in the life sciences. Well-characterized and quantified protein standards are needed to achieve accurate and reliable results. However, only a limited number of sufficiently characterized protein standards are cur...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Springer Berlin Heidelberg
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9142460/ https://www.ncbi.nlm.nih.gov/pubmed/35316347 http://dx.doi.org/10.1007/s00216-022-03974-z |
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author | Lemke, Nora El-Khatib, Ahmed H. Tchipilov, Teodor Jakubowski, Norbert Weller, Michael G. Vogl, Jochen |
author_facet | Lemke, Nora El-Khatib, Ahmed H. Tchipilov, Teodor Jakubowski, Norbert Weller, Michael G. Vogl, Jochen |
author_sort | Lemke, Nora |
collection | PubMed |
description | Quantitative proteomics is a growing research area and one of the most important tools in the life sciences. Well-characterized and quantified protein standards are needed to achieve accurate and reliable results. However, only a limited number of sufficiently characterized protein standards are currently available. To fill this gap, a method for traceable protein quantification using sulfur isotope dilution inductively coupled plasma mass spectrometry (ICP-MS) was developed in this study. Gel filtration and membrane filtration were tested for the separation of non-protein-bound sulfur in the protein solution. Membrane filtration demonstrated a better performance due to the lower workload and the very low sulfur blanks of 11 ng, making it well suited for high-purity proteins such as NIST SRM 927, a bovine serum albumin (BSA). The method development was accomplished with NIST SRM 927e and a commercial avidin. The quantified mass fraction of NIST SRM 927e agreed very well with the certified value and showed similar uncertainties (3.6%) as established methods while requiring less sample preparation and no species-specific standards. Finally, the developed procedure was applied to the tau protein, which is a biomarker for a group of neurodegenerative diseases denoted “tauopathies” including, e.g., Alzheimer’s disease and frontotemporal dementia. For the absolute quantification of tau in the brain of transgenic mice overexpressing human tau, a well-defined calibration standard was needed. Therefore, a pure tau solution was quantified, yielding a protein mass fraction of (0.328 ± 0.036) g/kg, which was confirmed by amino acid analysis. GRAPHICAL ABSTRACT: [Image: see text] SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1007/s00216-022-03974-z. |
format | Online Article Text |
id | pubmed-9142460 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Springer Berlin Heidelberg |
record_format | MEDLINE/PubMed |
spelling | pubmed-91424602022-05-29 Procedure providing SI-traceable results for the calibration of protein standards by sulfur determination and its application on tau Lemke, Nora El-Khatib, Ahmed H. Tchipilov, Teodor Jakubowski, Norbert Weller, Michael G. Vogl, Jochen Anal Bioanal Chem Research Paper Quantitative proteomics is a growing research area and one of the most important tools in the life sciences. Well-characterized and quantified protein standards are needed to achieve accurate and reliable results. However, only a limited number of sufficiently characterized protein standards are currently available. To fill this gap, a method for traceable protein quantification using sulfur isotope dilution inductively coupled plasma mass spectrometry (ICP-MS) was developed in this study. Gel filtration and membrane filtration were tested for the separation of non-protein-bound sulfur in the protein solution. Membrane filtration demonstrated a better performance due to the lower workload and the very low sulfur blanks of 11 ng, making it well suited for high-purity proteins such as NIST SRM 927, a bovine serum albumin (BSA). The method development was accomplished with NIST SRM 927e and a commercial avidin. The quantified mass fraction of NIST SRM 927e agreed very well with the certified value and showed similar uncertainties (3.6%) as established methods while requiring less sample preparation and no species-specific standards. Finally, the developed procedure was applied to the tau protein, which is a biomarker for a group of neurodegenerative diseases denoted “tauopathies” including, e.g., Alzheimer’s disease and frontotemporal dementia. For the absolute quantification of tau in the brain of transgenic mice overexpressing human tau, a well-defined calibration standard was needed. Therefore, a pure tau solution was quantified, yielding a protein mass fraction of (0.328 ± 0.036) g/kg, which was confirmed by amino acid analysis. GRAPHICAL ABSTRACT: [Image: see text] SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1007/s00216-022-03974-z. Springer Berlin Heidelberg 2022-03-22 2022 /pmc/articles/PMC9142460/ /pubmed/35316347 http://dx.doi.org/10.1007/s00216-022-03974-z Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Research Paper Lemke, Nora El-Khatib, Ahmed H. Tchipilov, Teodor Jakubowski, Norbert Weller, Michael G. Vogl, Jochen Procedure providing SI-traceable results for the calibration of protein standards by sulfur determination and its application on tau |
title | Procedure providing SI-traceable results for the calibration of protein standards by sulfur determination and its application on tau |
title_full | Procedure providing SI-traceable results for the calibration of protein standards by sulfur determination and its application on tau |
title_fullStr | Procedure providing SI-traceable results for the calibration of protein standards by sulfur determination and its application on tau |
title_full_unstemmed | Procedure providing SI-traceable results for the calibration of protein standards by sulfur determination and its application on tau |
title_short | Procedure providing SI-traceable results for the calibration of protein standards by sulfur determination and its application on tau |
title_sort | procedure providing si-traceable results for the calibration of protein standards by sulfur determination and its application on tau |
topic | Research Paper |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9142460/ https://www.ncbi.nlm.nih.gov/pubmed/35316347 http://dx.doi.org/10.1007/s00216-022-03974-z |
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