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Application of CRISPR/Cas9 System for Efficient Gene Editing in Peanut

Peanuts are an economically important crop cultivated worldwide. However, several limitations restrained its productivity, including biotic/abiotic stresses. CRISPR/Cas9-based gene-editing technology holds a promising approach to developing new crops with improved agronomic and nutritional traits. I...

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Autores principales: Neelakandan, Anjanasree K., Wright, David A., Traore, Sy M., Ma, Xingli, Subedi, Binita, Veeramasu, Suman, Spalding, Martin H., He, Guohao
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9144340/
https://www.ncbi.nlm.nih.gov/pubmed/35631786
http://dx.doi.org/10.3390/plants11101361
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author Neelakandan, Anjanasree K.
Wright, David A.
Traore, Sy M.
Ma, Xingli
Subedi, Binita
Veeramasu, Suman
Spalding, Martin H.
He, Guohao
author_facet Neelakandan, Anjanasree K.
Wright, David A.
Traore, Sy M.
Ma, Xingli
Subedi, Binita
Veeramasu, Suman
Spalding, Martin H.
He, Guohao
author_sort Neelakandan, Anjanasree K.
collection PubMed
description Peanuts are an economically important crop cultivated worldwide. However, several limitations restrained its productivity, including biotic/abiotic stresses. CRISPR/Cas9-based gene-editing technology holds a promising approach to developing new crops with improved agronomic and nutritional traits. Its application has been successful in many important crops. However, the application of this technology in peanut research is limited, probably due to the lack of suitable constructs and protocols. In this study, two different constructs were generated to induce insertion/deletion mutations in the targeted gene for a loss of function study. The first construct harbors the regular gRNA scaffold, while the second construct has the extended scaffold plus terminator. The designed gRNA targeting the coding sequence of the FAD2 genes was cloned into both constructs, and their functionality and efficiency were validated using the hairy root transformation system. Both constructs displayed insertions and deletions as the types of edits. The construct harboring the extended plus gRNA terminator showed a higher editing efficiency than the regular scaffold for monoallelic and biallelic mutations. These two constructs can be used for gene editing in peanuts and could provide tools for improving peanut lines for the benefit of peanut breeders, farmers, and industry.
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spelling pubmed-91443402022-05-29 Application of CRISPR/Cas9 System for Efficient Gene Editing in Peanut Neelakandan, Anjanasree K. Wright, David A. Traore, Sy M. Ma, Xingli Subedi, Binita Veeramasu, Suman Spalding, Martin H. He, Guohao Plants (Basel) Article Peanuts are an economically important crop cultivated worldwide. However, several limitations restrained its productivity, including biotic/abiotic stresses. CRISPR/Cas9-based gene-editing technology holds a promising approach to developing new crops with improved agronomic and nutritional traits. Its application has been successful in many important crops. However, the application of this technology in peanut research is limited, probably due to the lack of suitable constructs and protocols. In this study, two different constructs were generated to induce insertion/deletion mutations in the targeted gene for a loss of function study. The first construct harbors the regular gRNA scaffold, while the second construct has the extended scaffold plus terminator. The designed gRNA targeting the coding sequence of the FAD2 genes was cloned into both constructs, and their functionality and efficiency were validated using the hairy root transformation system. Both constructs displayed insertions and deletions as the types of edits. The construct harboring the extended plus gRNA terminator showed a higher editing efficiency than the regular scaffold for monoallelic and biallelic mutations. These two constructs can be used for gene editing in peanuts and could provide tools for improving peanut lines for the benefit of peanut breeders, farmers, and industry. MDPI 2022-05-20 /pmc/articles/PMC9144340/ /pubmed/35631786 http://dx.doi.org/10.3390/plants11101361 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Neelakandan, Anjanasree K.
Wright, David A.
Traore, Sy M.
Ma, Xingli
Subedi, Binita
Veeramasu, Suman
Spalding, Martin H.
He, Guohao
Application of CRISPR/Cas9 System for Efficient Gene Editing in Peanut
title Application of CRISPR/Cas9 System for Efficient Gene Editing in Peanut
title_full Application of CRISPR/Cas9 System for Efficient Gene Editing in Peanut
title_fullStr Application of CRISPR/Cas9 System for Efficient Gene Editing in Peanut
title_full_unstemmed Application of CRISPR/Cas9 System for Efficient Gene Editing in Peanut
title_short Application of CRISPR/Cas9 System for Efficient Gene Editing in Peanut
title_sort application of crispr/cas9 system for efficient gene editing in peanut
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9144340/
https://www.ncbi.nlm.nih.gov/pubmed/35631786
http://dx.doi.org/10.3390/plants11101361
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