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An Attention-Guided Spatiotemporal Graph Convolutional Network for Sleep Stage Classification

Sleep staging has been widely used as an approach in sleep diagnoses at sleep clinics. Graph neural network (GNN)-based methods have been extensively applied for automatic sleep stage classifications with significant results. However, the existing GNN-based methods rely on a static adjacency matrix...

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Autores principales: Li, Menglei, Chen, Hongbo, Cheng, Zixue
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9144567/
https://www.ncbi.nlm.nih.gov/pubmed/35629290
http://dx.doi.org/10.3390/life12050622
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author Li, Menglei
Chen, Hongbo
Cheng, Zixue
author_facet Li, Menglei
Chen, Hongbo
Cheng, Zixue
author_sort Li, Menglei
collection PubMed
description Sleep staging has been widely used as an approach in sleep diagnoses at sleep clinics. Graph neural network (GNN)-based methods have been extensively applied for automatic sleep stage classifications with significant results. However, the existing GNN-based methods rely on a static adjacency matrix to capture the features of the different electroencephalogram (EEG) channels, which cannot grasp the information of each electrode. Meanwhile, these methods ignore the importance of spatiotemporal relations in classifying sleep stages. In this work, we propose a combination of a dynamic and static spatiotemporal graph convolutional network (ST-GCN) with inter-temporal attention blocks to overcome two shortcomings. The proposed method consists of a GCN with a CNN that takes into account the intra-frame dependency of each electrode in the brain region to extract spatial and temporal features separately. In addition, the attention block was used to capture the long-range dependencies between the different electrodes in the brain region, which helps the model to classify the dynamics of each sleep stage more accurately. In our experiments, we used the sleep-EDF and the subgroup III of the ISRUC-SLEEP dataset to compare with the most current methods. The results show that our method performs better in accuracy from 4.6% to 5.3%, in Kappa from 0.06 to 0.07, and in macro-F score from 4.9% to 5.7%. The proposed method has the potential to be an effective tool for improving sleep disorders.
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spelling pubmed-91445672022-05-29 An Attention-Guided Spatiotemporal Graph Convolutional Network for Sleep Stage Classification Li, Menglei Chen, Hongbo Cheng, Zixue Life (Basel) Article Sleep staging has been widely used as an approach in sleep diagnoses at sleep clinics. Graph neural network (GNN)-based methods have been extensively applied for automatic sleep stage classifications with significant results. However, the existing GNN-based methods rely on a static adjacency matrix to capture the features of the different electroencephalogram (EEG) channels, which cannot grasp the information of each electrode. Meanwhile, these methods ignore the importance of spatiotemporal relations in classifying sleep stages. In this work, we propose a combination of a dynamic and static spatiotemporal graph convolutional network (ST-GCN) with inter-temporal attention blocks to overcome two shortcomings. The proposed method consists of a GCN with a CNN that takes into account the intra-frame dependency of each electrode in the brain region to extract spatial and temporal features separately. In addition, the attention block was used to capture the long-range dependencies between the different electrodes in the brain region, which helps the model to classify the dynamics of each sleep stage more accurately. In our experiments, we used the sleep-EDF and the subgroup III of the ISRUC-SLEEP dataset to compare with the most current methods. The results show that our method performs better in accuracy from 4.6% to 5.3%, in Kappa from 0.06 to 0.07, and in macro-F score from 4.9% to 5.7%. The proposed method has the potential to be an effective tool for improving sleep disorders. MDPI 2022-04-21 /pmc/articles/PMC9144567/ /pubmed/35629290 http://dx.doi.org/10.3390/life12050622 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Li, Menglei
Chen, Hongbo
Cheng, Zixue
An Attention-Guided Spatiotemporal Graph Convolutional Network for Sleep Stage Classification
title An Attention-Guided Spatiotemporal Graph Convolutional Network for Sleep Stage Classification
title_full An Attention-Guided Spatiotemporal Graph Convolutional Network for Sleep Stage Classification
title_fullStr An Attention-Guided Spatiotemporal Graph Convolutional Network for Sleep Stage Classification
title_full_unstemmed An Attention-Guided Spatiotemporal Graph Convolutional Network for Sleep Stage Classification
title_short An Attention-Guided Spatiotemporal Graph Convolutional Network for Sleep Stage Classification
title_sort attention-guided spatiotemporal graph convolutional network for sleep stage classification
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9144567/
https://www.ncbi.nlm.nih.gov/pubmed/35629290
http://dx.doi.org/10.3390/life12050622
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