Cargando…

A Novel Method Based on GAN Using a Segmentation Module for Oligodendroglioma Pathological Image Generation

Digital pathology analysis using deep learning has been the subject of several studies. As with other medical data, pathological data are not easily obtained. Because deep learning-based image analysis requires large amounts of data, augmentation techniques are used to increase the size of pathologi...

Descripción completa

Detalles Bibliográficos
Autores principales: Kweon, Juwon, Yoo, Jisang, Kim, Seungjong, Won, Jaesik, Kwon, Soonchul
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9144585/
https://www.ncbi.nlm.nih.gov/pubmed/35632368
http://dx.doi.org/10.3390/s22103960
_version_ 1784716084018937856
author Kweon, Juwon
Yoo, Jisang
Kim, Seungjong
Won, Jaesik
Kwon, Soonchul
author_facet Kweon, Juwon
Yoo, Jisang
Kim, Seungjong
Won, Jaesik
Kwon, Soonchul
author_sort Kweon, Juwon
collection PubMed
description Digital pathology analysis using deep learning has been the subject of several studies. As with other medical data, pathological data are not easily obtained. Because deep learning-based image analysis requires large amounts of data, augmentation techniques are used to increase the size of pathological datasets. This study proposes a novel method for synthesizing brain tumor pathology data using a generative model. For image synthesis, we used embedding features extracted from a segmentation module in a general generative model. We also introduce a simple solution for training a segmentation model in an environment in which the masked label of the training dataset is not supplied. As a result of this experiment, the proposed method did not make great progress in quantitative metrics but showed improved results in the confusion rate of more than 70 subjects and the quality of the visual output.
format Online
Article
Text
id pubmed-9144585
institution National Center for Biotechnology Information
language English
publishDate 2022
publisher MDPI
record_format MEDLINE/PubMed
spelling pubmed-91445852022-05-29 A Novel Method Based on GAN Using a Segmentation Module for Oligodendroglioma Pathological Image Generation Kweon, Juwon Yoo, Jisang Kim, Seungjong Won, Jaesik Kwon, Soonchul Sensors (Basel) Article Digital pathology analysis using deep learning has been the subject of several studies. As with other medical data, pathological data are not easily obtained. Because deep learning-based image analysis requires large amounts of data, augmentation techniques are used to increase the size of pathological datasets. This study proposes a novel method for synthesizing brain tumor pathology data using a generative model. For image synthesis, we used embedding features extracted from a segmentation module in a general generative model. We also introduce a simple solution for training a segmentation model in an environment in which the masked label of the training dataset is not supplied. As a result of this experiment, the proposed method did not make great progress in quantitative metrics but showed improved results in the confusion rate of more than 70 subjects and the quality of the visual output. MDPI 2022-05-23 /pmc/articles/PMC9144585/ /pubmed/35632368 http://dx.doi.org/10.3390/s22103960 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Kweon, Juwon
Yoo, Jisang
Kim, Seungjong
Won, Jaesik
Kwon, Soonchul
A Novel Method Based on GAN Using a Segmentation Module for Oligodendroglioma Pathological Image Generation
title A Novel Method Based on GAN Using a Segmentation Module for Oligodendroglioma Pathological Image Generation
title_full A Novel Method Based on GAN Using a Segmentation Module for Oligodendroglioma Pathological Image Generation
title_fullStr A Novel Method Based on GAN Using a Segmentation Module for Oligodendroglioma Pathological Image Generation
title_full_unstemmed A Novel Method Based on GAN Using a Segmentation Module for Oligodendroglioma Pathological Image Generation
title_short A Novel Method Based on GAN Using a Segmentation Module for Oligodendroglioma Pathological Image Generation
title_sort novel method based on gan using a segmentation module for oligodendroglioma pathological image generation
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9144585/
https://www.ncbi.nlm.nih.gov/pubmed/35632368
http://dx.doi.org/10.3390/s22103960
work_keys_str_mv AT kweonjuwon anovelmethodbasedonganusingasegmentationmoduleforoligodendrogliomapathologicalimagegeneration
AT yoojisang anovelmethodbasedonganusingasegmentationmoduleforoligodendrogliomapathologicalimagegeneration
AT kimseungjong anovelmethodbasedonganusingasegmentationmoduleforoligodendrogliomapathologicalimagegeneration
AT wonjaesik anovelmethodbasedonganusingasegmentationmoduleforoligodendrogliomapathologicalimagegeneration
AT kwonsoonchul anovelmethodbasedonganusingasegmentationmoduleforoligodendrogliomapathologicalimagegeneration
AT kweonjuwon novelmethodbasedonganusingasegmentationmoduleforoligodendrogliomapathologicalimagegeneration
AT yoojisang novelmethodbasedonganusingasegmentationmoduleforoligodendrogliomapathologicalimagegeneration
AT kimseungjong novelmethodbasedonganusingasegmentationmoduleforoligodendrogliomapathologicalimagegeneration
AT wonjaesik novelmethodbasedonganusingasegmentationmoduleforoligodendrogliomapathologicalimagegeneration
AT kwonsoonchul novelmethodbasedonganusingasegmentationmoduleforoligodendrogliomapathologicalimagegeneration