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In Silico Analysis and Functional Characterization of Antimicrobial and Insecticidal Vicilin from Moth Bean (Vigna aconitifolia (Jacq.) Marechal) Seeds

Vicilin has nutraceutical potential and different noteworthy medicative health-promoting biotic diversions, and it is remarkable against pathogenic microorganisms and insects. In this study, Vigna aconitifolia vicilin (VacV) has been identified and characterized from the seed of Vigna aconitifolia (...

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Autores principales: Ateeq, Muhammad, Adeel, Muhammad Muzammal, Kanwal, Ayesha, Tahir ul Qamar, Muhammad, Saeed, Ahsan, Khaliq, Binish, Saeed, Qamar, Atiq, Muhammad Nauman, Bilal, Muhammad, Alharbi, Metab, Alshammari, Abdulrahman, Akrem, Ahmed
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9145308/
https://www.ncbi.nlm.nih.gov/pubmed/35630727
http://dx.doi.org/10.3390/molecules27103251
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author Ateeq, Muhammad
Adeel, Muhammad Muzammal
Kanwal, Ayesha
Tahir ul Qamar, Muhammad
Saeed, Ahsan
Khaliq, Binish
Saeed, Qamar
Atiq, Muhammad Nauman
Bilal, Muhammad
Alharbi, Metab
Alshammari, Abdulrahman
Akrem, Ahmed
author_facet Ateeq, Muhammad
Adeel, Muhammad Muzammal
Kanwal, Ayesha
Tahir ul Qamar, Muhammad
Saeed, Ahsan
Khaliq, Binish
Saeed, Qamar
Atiq, Muhammad Nauman
Bilal, Muhammad
Alharbi, Metab
Alshammari, Abdulrahman
Akrem, Ahmed
author_sort Ateeq, Muhammad
collection PubMed
description Vicilin has nutraceutical potential and different noteworthy medicative health-promoting biotic diversions, and it is remarkable against pathogenic microorganisms and insects. In this study, Vigna aconitifolia vicilin (VacV) has been identified and characterized from the seed of Vigna aconitifolia (Jacq.) Marechal (Moth beans). LC-MS/MS analysis of VacV provided seven random fragmented sequences comprising 238 residues, showing significant homology with already reported Vigna radiata vicilin (VraV). VacV was purified using ammonium sulfate precipitation (60%) followed by size exclusion chromatography on Hi-Load 16/60 Superdex 200 pg column and anion-exchange chromatography (Hi trap Q FF column). Purified VacV showed a major ~50 kDa band and multiple lower bands on 12% sodium dodecyl sulfate polyacrylamide gel electrophoresis (SDS-PAGE) under both reduced and non-reduced conditions. After all, a three-dimensional molecular structure of VacV was predicted, which showed β-sheeted molecular conformation similar to crystallographic structure of VraV. All Vicilins from V. aconitifolia and other plants were divided into six sub-groups by phylogenetic analysis, and VacV shared a high degree of similarity with vicilins of Vigna radiata, Pisum sativum, Lupinus albus, Cicer arietinum and Glycine max. Additionally, VacV (20 μg) has significant growth inhibition against different pathogenic bacteria along strong antifungal activity (50 μg). Likewise, VacV (3.0 mg) produced significant growth reduction in Rice Weevil Sitophilus oryzae larvae after 9 days compared with control. Furthermore, by using MMT assay, the cytotoxicity effect of VacV on the growth of HepG2 liver cancerous cells was tested. VacV showed cytotoxicity against the HepG-2 line and the acquired value was 180 µg after 48 h. Finally, we performed molecular docking against caspase-3 protein (PDB ID: 3DEI) for VacV bioactive receptor interface residues. Hence, our results reveal that VacV, has nutraceutical potential and moth beans can be used as a rich resource of functional foods.
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spelling pubmed-91453082022-05-29 In Silico Analysis and Functional Characterization of Antimicrobial and Insecticidal Vicilin from Moth Bean (Vigna aconitifolia (Jacq.) Marechal) Seeds Ateeq, Muhammad Adeel, Muhammad Muzammal Kanwal, Ayesha Tahir ul Qamar, Muhammad Saeed, Ahsan Khaliq, Binish Saeed, Qamar Atiq, Muhammad Nauman Bilal, Muhammad Alharbi, Metab Alshammari, Abdulrahman Akrem, Ahmed Molecules Article Vicilin has nutraceutical potential and different noteworthy medicative health-promoting biotic diversions, and it is remarkable against pathogenic microorganisms and insects. In this study, Vigna aconitifolia vicilin (VacV) has been identified and characterized from the seed of Vigna aconitifolia (Jacq.) Marechal (Moth beans). LC-MS/MS analysis of VacV provided seven random fragmented sequences comprising 238 residues, showing significant homology with already reported Vigna radiata vicilin (VraV). VacV was purified using ammonium sulfate precipitation (60%) followed by size exclusion chromatography on Hi-Load 16/60 Superdex 200 pg column and anion-exchange chromatography (Hi trap Q FF column). Purified VacV showed a major ~50 kDa band and multiple lower bands on 12% sodium dodecyl sulfate polyacrylamide gel electrophoresis (SDS-PAGE) under both reduced and non-reduced conditions. After all, a three-dimensional molecular structure of VacV was predicted, which showed β-sheeted molecular conformation similar to crystallographic structure of VraV. All Vicilins from V. aconitifolia and other plants were divided into six sub-groups by phylogenetic analysis, and VacV shared a high degree of similarity with vicilins of Vigna radiata, Pisum sativum, Lupinus albus, Cicer arietinum and Glycine max. Additionally, VacV (20 μg) has significant growth inhibition against different pathogenic bacteria along strong antifungal activity (50 μg). Likewise, VacV (3.0 mg) produced significant growth reduction in Rice Weevil Sitophilus oryzae larvae after 9 days compared with control. Furthermore, by using MMT assay, the cytotoxicity effect of VacV on the growth of HepG2 liver cancerous cells was tested. VacV showed cytotoxicity against the HepG-2 line and the acquired value was 180 µg after 48 h. Finally, we performed molecular docking against caspase-3 protein (PDB ID: 3DEI) for VacV bioactive receptor interface residues. Hence, our results reveal that VacV, has nutraceutical potential and moth beans can be used as a rich resource of functional foods. MDPI 2022-05-19 /pmc/articles/PMC9145308/ /pubmed/35630727 http://dx.doi.org/10.3390/molecules27103251 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Ateeq, Muhammad
Adeel, Muhammad Muzammal
Kanwal, Ayesha
Tahir ul Qamar, Muhammad
Saeed, Ahsan
Khaliq, Binish
Saeed, Qamar
Atiq, Muhammad Nauman
Bilal, Muhammad
Alharbi, Metab
Alshammari, Abdulrahman
Akrem, Ahmed
In Silico Analysis and Functional Characterization of Antimicrobial and Insecticidal Vicilin from Moth Bean (Vigna aconitifolia (Jacq.) Marechal) Seeds
title In Silico Analysis and Functional Characterization of Antimicrobial and Insecticidal Vicilin from Moth Bean (Vigna aconitifolia (Jacq.) Marechal) Seeds
title_full In Silico Analysis and Functional Characterization of Antimicrobial and Insecticidal Vicilin from Moth Bean (Vigna aconitifolia (Jacq.) Marechal) Seeds
title_fullStr In Silico Analysis and Functional Characterization of Antimicrobial and Insecticidal Vicilin from Moth Bean (Vigna aconitifolia (Jacq.) Marechal) Seeds
title_full_unstemmed In Silico Analysis and Functional Characterization of Antimicrobial and Insecticidal Vicilin from Moth Bean (Vigna aconitifolia (Jacq.) Marechal) Seeds
title_short In Silico Analysis and Functional Characterization of Antimicrobial and Insecticidal Vicilin from Moth Bean (Vigna aconitifolia (Jacq.) Marechal) Seeds
title_sort in silico analysis and functional characterization of antimicrobial and insecticidal vicilin from moth bean (vigna aconitifolia (jacq.) marechal) seeds
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9145308/
https://www.ncbi.nlm.nih.gov/pubmed/35630727
http://dx.doi.org/10.3390/molecules27103251
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