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Fast Analysis of Time-Domain Fluorescence Lifetime Imaging via Extreme Learning Machine

We present a fast and accurate analytical method for fluorescence lifetime imaging microscopy (FLIM), using the extreme learning machine (ELM). We used extensive metrics to evaluate ELM and existing algorithms. First, we compared these algorithms using synthetic datasets. The results indicate that E...

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Detalles Bibliográficos
Autores principales: Zang, Zhenya, Xiao, Dong, Wang, Quan, Li, Zinuo, Xie, Wujun, Chen, Yu, Li, David Day Uei
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9146214/
https://www.ncbi.nlm.nih.gov/pubmed/35632167
http://dx.doi.org/10.3390/s22103758
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author Zang, Zhenya
Xiao, Dong
Wang, Quan
Li, Zinuo
Xie, Wujun
Chen, Yu
Li, David Day Uei
author_facet Zang, Zhenya
Xiao, Dong
Wang, Quan
Li, Zinuo
Xie, Wujun
Chen, Yu
Li, David Day Uei
author_sort Zang, Zhenya
collection PubMed
description We present a fast and accurate analytical method for fluorescence lifetime imaging microscopy (FLIM), using the extreme learning machine (ELM). We used extensive metrics to evaluate ELM and existing algorithms. First, we compared these algorithms using synthetic datasets. The results indicate that ELM can obtain higher fidelity, even in low-photon conditions. Afterwards, we used ELM to retrieve lifetime components from human prostate cancer cells loaded with gold nanosensors, showing that ELM also outperforms the iterative fitting and non-fitting algorithms. By comparing ELM with a computational efficient neural network, ELM achieves comparable accuracy with less training and inference time. As there is no back-propagation process for ELM during the training phase, the training speed is much higher than existing neural network approaches. The proposed strategy is promising for edge computing with online training.
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spelling pubmed-91462142022-05-29 Fast Analysis of Time-Domain Fluorescence Lifetime Imaging via Extreme Learning Machine Zang, Zhenya Xiao, Dong Wang, Quan Li, Zinuo Xie, Wujun Chen, Yu Li, David Day Uei Sensors (Basel) Article We present a fast and accurate analytical method for fluorescence lifetime imaging microscopy (FLIM), using the extreme learning machine (ELM). We used extensive metrics to evaluate ELM and existing algorithms. First, we compared these algorithms using synthetic datasets. The results indicate that ELM can obtain higher fidelity, even in low-photon conditions. Afterwards, we used ELM to retrieve lifetime components from human prostate cancer cells loaded with gold nanosensors, showing that ELM also outperforms the iterative fitting and non-fitting algorithms. By comparing ELM with a computational efficient neural network, ELM achieves comparable accuracy with less training and inference time. As there is no back-propagation process for ELM during the training phase, the training speed is much higher than existing neural network approaches. The proposed strategy is promising for edge computing with online training. MDPI 2022-05-15 /pmc/articles/PMC9146214/ /pubmed/35632167 http://dx.doi.org/10.3390/s22103758 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Zang, Zhenya
Xiao, Dong
Wang, Quan
Li, Zinuo
Xie, Wujun
Chen, Yu
Li, David Day Uei
Fast Analysis of Time-Domain Fluorescence Lifetime Imaging via Extreme Learning Machine
title Fast Analysis of Time-Domain Fluorescence Lifetime Imaging via Extreme Learning Machine
title_full Fast Analysis of Time-Domain Fluorescence Lifetime Imaging via Extreme Learning Machine
title_fullStr Fast Analysis of Time-Domain Fluorescence Lifetime Imaging via Extreme Learning Machine
title_full_unstemmed Fast Analysis of Time-Domain Fluorescence Lifetime Imaging via Extreme Learning Machine
title_short Fast Analysis of Time-Domain Fluorescence Lifetime Imaging via Extreme Learning Machine
title_sort fast analysis of time-domain fluorescence lifetime imaging via extreme learning machine
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9146214/
https://www.ncbi.nlm.nih.gov/pubmed/35632167
http://dx.doi.org/10.3390/s22103758
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