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Using an ATR-FTIR Technique to Detect Pathogens in Patients with Urinary Tract Infections: A Pilot Study

Urinary tract infections (UTIs) are a leading hospital-acquired infection. Although timely detection of causative pathogens of UTIs is important, rapid and accurate measures assisting UTI diagnosis and bacterial determination are poorly developed. By reading infrared spectra of urine samples, Fourie...

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Autores principales: Pan, Sheng-Wei, Lu, Hsiao-Chi, Lo, Jen-Iu, Ho, Li-Ing, Tseng, Ton-Rong, Ho, Mei-Lin, Cheng, Bing-Ming
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9147530/
https://www.ncbi.nlm.nih.gov/pubmed/35632048
http://dx.doi.org/10.3390/s22103638
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author Pan, Sheng-Wei
Lu, Hsiao-Chi
Lo, Jen-Iu
Ho, Li-Ing
Tseng, Ton-Rong
Ho, Mei-Lin
Cheng, Bing-Ming
author_facet Pan, Sheng-Wei
Lu, Hsiao-Chi
Lo, Jen-Iu
Ho, Li-Ing
Tseng, Ton-Rong
Ho, Mei-Lin
Cheng, Bing-Ming
author_sort Pan, Sheng-Wei
collection PubMed
description Urinary tract infections (UTIs) are a leading hospital-acquired infection. Although timely detection of causative pathogens of UTIs is important, rapid and accurate measures assisting UTI diagnosis and bacterial determination are poorly developed. By reading infrared spectra of urine samples, Fourier-transform infrared spectroscopy (FTIR) may help detect urine compounds, but its role in UTI diagnosis remains uncertain. In this pilot study, we proposed a characterization method in attenuated total reflection (ATR)-FTIR spectra to evaluate urine samples and assessed the correlation between ATR-FTIR patterns, UTI diagnosis, and causative pathogens. We enrolled patients with a catheter-associated UTI in a subacute-care unit and non-UTI controls (total n = 18), and used urine culture to confirm the causative pathogens of the UTIs. In the ATR-FTIR analysis, the spectral variation between the UTI group and non-UTI, as well as that between various pathogens, was found in a range of 1800–900 cm(−1), referring to the presence of specific constituents of the bacterial cell wall. The results indicated that the relative ratios between different area zones of vibration, as well as multivariate analysis, can be used as a clue to discriminate between UTI and non-UTI, as well as different causative pathogens of UTIs. This warrants a further large-scale study to validate the findings of this pilot research.
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spelling pubmed-91475302022-05-29 Using an ATR-FTIR Technique to Detect Pathogens in Patients with Urinary Tract Infections: A Pilot Study Pan, Sheng-Wei Lu, Hsiao-Chi Lo, Jen-Iu Ho, Li-Ing Tseng, Ton-Rong Ho, Mei-Lin Cheng, Bing-Ming Sensors (Basel) Article Urinary tract infections (UTIs) are a leading hospital-acquired infection. Although timely detection of causative pathogens of UTIs is important, rapid and accurate measures assisting UTI diagnosis and bacterial determination are poorly developed. By reading infrared spectra of urine samples, Fourier-transform infrared spectroscopy (FTIR) may help detect urine compounds, but its role in UTI diagnosis remains uncertain. In this pilot study, we proposed a characterization method in attenuated total reflection (ATR)-FTIR spectra to evaluate urine samples and assessed the correlation between ATR-FTIR patterns, UTI diagnosis, and causative pathogens. We enrolled patients with a catheter-associated UTI in a subacute-care unit and non-UTI controls (total n = 18), and used urine culture to confirm the causative pathogens of the UTIs. In the ATR-FTIR analysis, the spectral variation between the UTI group and non-UTI, as well as that between various pathogens, was found in a range of 1800–900 cm(−1), referring to the presence of specific constituents of the bacterial cell wall. The results indicated that the relative ratios between different area zones of vibration, as well as multivariate analysis, can be used as a clue to discriminate between UTI and non-UTI, as well as different causative pathogens of UTIs. This warrants a further large-scale study to validate the findings of this pilot research. MDPI 2022-05-10 /pmc/articles/PMC9147530/ /pubmed/35632048 http://dx.doi.org/10.3390/s22103638 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Pan, Sheng-Wei
Lu, Hsiao-Chi
Lo, Jen-Iu
Ho, Li-Ing
Tseng, Ton-Rong
Ho, Mei-Lin
Cheng, Bing-Ming
Using an ATR-FTIR Technique to Detect Pathogens in Patients with Urinary Tract Infections: A Pilot Study
title Using an ATR-FTIR Technique to Detect Pathogens in Patients with Urinary Tract Infections: A Pilot Study
title_full Using an ATR-FTIR Technique to Detect Pathogens in Patients with Urinary Tract Infections: A Pilot Study
title_fullStr Using an ATR-FTIR Technique to Detect Pathogens in Patients with Urinary Tract Infections: A Pilot Study
title_full_unstemmed Using an ATR-FTIR Technique to Detect Pathogens in Patients with Urinary Tract Infections: A Pilot Study
title_short Using an ATR-FTIR Technique to Detect Pathogens in Patients with Urinary Tract Infections: A Pilot Study
title_sort using an atr-ftir technique to detect pathogens in patients with urinary tract infections: a pilot study
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9147530/
https://www.ncbi.nlm.nih.gov/pubmed/35632048
http://dx.doi.org/10.3390/s22103638
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