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DNA Barcoding Medicinal Plant Species from Indonesia

Over the past decade, plant DNA barcoding has emerged as a scientific breakthrough and is often used to help with species identification or as a taxonomical tool. DNA barcoding is very important in medicinal plant use, not only for identification purposes but also for the authentication of medicinal...

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Autores principales: Cahyaningsih, Ria, Compton, Lindsey Jane, Rahayu, Sri, Magos Brehm, Joana, Maxted, Nigel
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9147630/
https://www.ncbi.nlm.nih.gov/pubmed/35631799
http://dx.doi.org/10.3390/plants11101375
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author Cahyaningsih, Ria
Compton, Lindsey Jane
Rahayu, Sri
Magos Brehm, Joana
Maxted, Nigel
author_facet Cahyaningsih, Ria
Compton, Lindsey Jane
Rahayu, Sri
Magos Brehm, Joana
Maxted, Nigel
author_sort Cahyaningsih, Ria
collection PubMed
description Over the past decade, plant DNA barcoding has emerged as a scientific breakthrough and is often used to help with species identification or as a taxonomical tool. DNA barcoding is very important in medicinal plant use, not only for identification purposes but also for the authentication of medicinal products. Here, a total of 61 Indonesian medicinal plant species from 30 families and a pair of ITS2, matK, rbcL, and trnL primers were used for a DNA barcoding study consisting of molecular and sequence analyses. This study aimed to analyze how the four identified DNA barcoding regions (ITS2, matK, rbcL, and trnL) aid identification and conservation and to investigate their effectiveness for DNA barcoding for the studied species. This study resulted in 212 DNA barcoding sequences and identified new ones for the studied medicinal plant species. Though there is no ideal or perfect region for DNA barcoding of the target species, we recommend matK as the main region for Indonesian medicinal plant identification, with ITS2 and rbcL as alternative or complementary regions. These findings will be useful for forensic studies that support the conservation of medicinal plants and their national and global use.
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spelling pubmed-91476302022-05-29 DNA Barcoding Medicinal Plant Species from Indonesia Cahyaningsih, Ria Compton, Lindsey Jane Rahayu, Sri Magos Brehm, Joana Maxted, Nigel Plants (Basel) Article Over the past decade, plant DNA barcoding has emerged as a scientific breakthrough and is often used to help with species identification or as a taxonomical tool. DNA barcoding is very important in medicinal plant use, not only for identification purposes but also for the authentication of medicinal products. Here, a total of 61 Indonesian medicinal plant species from 30 families and a pair of ITS2, matK, rbcL, and trnL primers were used for a DNA barcoding study consisting of molecular and sequence analyses. This study aimed to analyze how the four identified DNA barcoding regions (ITS2, matK, rbcL, and trnL) aid identification and conservation and to investigate their effectiveness for DNA barcoding for the studied species. This study resulted in 212 DNA barcoding sequences and identified new ones for the studied medicinal plant species. Though there is no ideal or perfect region for DNA barcoding of the target species, we recommend matK as the main region for Indonesian medicinal plant identification, with ITS2 and rbcL as alternative or complementary regions. These findings will be useful for forensic studies that support the conservation of medicinal plants and their national and global use. MDPI 2022-05-21 /pmc/articles/PMC9147630/ /pubmed/35631799 http://dx.doi.org/10.3390/plants11101375 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Cahyaningsih, Ria
Compton, Lindsey Jane
Rahayu, Sri
Magos Brehm, Joana
Maxted, Nigel
DNA Barcoding Medicinal Plant Species from Indonesia
title DNA Barcoding Medicinal Plant Species from Indonesia
title_full DNA Barcoding Medicinal Plant Species from Indonesia
title_fullStr DNA Barcoding Medicinal Plant Species from Indonesia
title_full_unstemmed DNA Barcoding Medicinal Plant Species from Indonesia
title_short DNA Barcoding Medicinal Plant Species from Indonesia
title_sort dna barcoding medicinal plant species from indonesia
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9147630/
https://www.ncbi.nlm.nih.gov/pubmed/35631799
http://dx.doi.org/10.3390/plants11101375
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