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FragGeneScanRs: faster gene prediction for short reads

BACKGROUND: FragGeneScan is currently the most accurate and popular tool for gene prediction in short and error-prone reads, but its execution speed is insufficient for use on larger data sets. The parallelization which should have addressed this is inefficient. Its alternative implementation FragGe...

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Detalles Bibliográficos
Autores principales: Van der Jeugt, Felix, Dawyndt, Peter, Mesuere, Bart
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9148508/
https://www.ncbi.nlm.nih.gov/pubmed/35643462
http://dx.doi.org/10.1186/s12859-022-04736-5