Cargando…

Defining Levels of Automated Chemical Design

[Image: see text] One application area of computational methods in drug discovery is the automated design of small molecules. Despite the large number of publications describing methods and their application in both retrospective and prospective studies, there is a lack of agreement on terminology a...

Descripción completa

Detalles Bibliográficos
Autores principales: Goldman, Brian, Kearnes, Steven, Kramer, Trevor, Riley, Patrick, Walters, W. Patrick
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Chemical Society 2022
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9150065/
https://www.ncbi.nlm.nih.gov/pubmed/35511951
http://dx.doi.org/10.1021/acs.jmedchem.2c00334
_version_ 1784717345234616320
author Goldman, Brian
Kearnes, Steven
Kramer, Trevor
Riley, Patrick
Walters, W. Patrick
author_facet Goldman, Brian
Kearnes, Steven
Kramer, Trevor
Riley, Patrick
Walters, W. Patrick
author_sort Goldman, Brian
collection PubMed
description [Image: see text] One application area of computational methods in drug discovery is the automated design of small molecules. Despite the large number of publications describing methods and their application in both retrospective and prospective studies, there is a lack of agreement on terminology and key attributes to distinguish these various systems. We introduce Automated Chemical Design (ACD) Levels to clearly define the level of autonomy along the axes of ideation and decision making. To fully illustrate this framework, we provide literature exemplars and place some notable methods and applications into the levels. The ACD framework provides a common language for describing automated small molecule design systems and enables medicinal chemists to better understand and evaluate such systems.
format Online
Article
Text
id pubmed-9150065
institution National Center for Biotechnology Information
language English
publishDate 2022
publisher American Chemical Society
record_format MEDLINE/PubMed
spelling pubmed-91500652022-05-31 Defining Levels of Automated Chemical Design Goldman, Brian Kearnes, Steven Kramer, Trevor Riley, Patrick Walters, W. Patrick J Med Chem [Image: see text] One application area of computational methods in drug discovery is the automated design of small molecules. Despite the large number of publications describing methods and their application in both retrospective and prospective studies, there is a lack of agreement on terminology and key attributes to distinguish these various systems. We introduce Automated Chemical Design (ACD) Levels to clearly define the level of autonomy along the axes of ideation and decision making. To fully illustrate this framework, we provide literature exemplars and place some notable methods and applications into the levels. The ACD framework provides a common language for describing automated small molecule design systems and enables medicinal chemists to better understand and evaluate such systems. American Chemical Society 2022-05-05 2022-05-26 /pmc/articles/PMC9150065/ /pubmed/35511951 http://dx.doi.org/10.1021/acs.jmedchem.2c00334 Text en © 2022 The Authors. Published by American Chemical Society https://creativecommons.org/licenses/by-nc-nd/4.0/Permits non-commercial access and re-use, provided that author attribution and integrity are maintained; but does not permit creation of adaptations or other derivative works (https://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Goldman, Brian
Kearnes, Steven
Kramer, Trevor
Riley, Patrick
Walters, W. Patrick
Defining Levels of Automated Chemical Design
title Defining Levels of Automated Chemical Design
title_full Defining Levels of Automated Chemical Design
title_fullStr Defining Levels of Automated Chemical Design
title_full_unstemmed Defining Levels of Automated Chemical Design
title_short Defining Levels of Automated Chemical Design
title_sort defining levels of automated chemical design
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9150065/
https://www.ncbi.nlm.nih.gov/pubmed/35511951
http://dx.doi.org/10.1021/acs.jmedchem.2c00334
work_keys_str_mv AT goldmanbrian defininglevelsofautomatedchemicaldesign
AT kearnessteven defininglevelsofautomatedchemicaldesign
AT kramertrevor defininglevelsofautomatedchemicaldesign
AT rileypatrick defininglevelsofautomatedchemicaldesign
AT walterswpatrick defininglevelsofautomatedchemicaldesign