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Model Segmentation in Single Particle Tracking
In this paper, we implement and compare two different change detection techniques applied to determining the time points in Single Particle Tracking (SPT) data where the particle changes the dynamic model of motion. The goal is to use this change detection to segment the data in order to estimate th...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9150762/ https://www.ncbi.nlm.nih.gov/pubmed/35642218 http://dx.doi.org/10.1016/j.ifacol.2021.11.197 |
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author | Godoy, Boris I. Vickers, Nicholas A. Andersson, Sean B. |
author_facet | Godoy, Boris I. Vickers, Nicholas A. Andersson, Sean B. |
author_sort | Godoy, Boris I. |
collection | PubMed |
description | In this paper, we implement and compare two different change detection techniques applied to determining the time points in Single Particle Tracking (SPT) data where the particle changes the dynamic model of motion. The goal is to use this change detection to segment the data in order to estimate the relevant parameters of such models. We consider two well-known statistics commonly used for change detection: the likelihood ratio test (LRT) and the Kullback-Leibler divergence (KLD). We assume that our time-varying system is subject to step-like changes in the parameters that drive the process. The techniques are then applied to experimental data acquired on a microscope under controlled settings to validate our results. |
format | Online Article Text |
id | pubmed-9150762 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
record_format | MEDLINE/PubMed |
spelling | pubmed-91507622022-12-15 Model Segmentation in Single Particle Tracking Godoy, Boris I. Vickers, Nicholas A. Andersson, Sean B. Proc IFAC World Congress Article In this paper, we implement and compare two different change detection techniques applied to determining the time points in Single Particle Tracking (SPT) data where the particle changes the dynamic model of motion. The goal is to use this change detection to segment the data in order to estimate the relevant parameters of such models. We consider two well-known statistics commonly used for change detection: the likelihood ratio test (LRT) and the Kullback-Leibler divergence (KLD). We assume that our time-varying system is subject to step-like changes in the parameters that drive the process. The techniques are then applied to experimental data acquired on a microscope under controlled settings to validate our results. 2021 2021-12-15 /pmc/articles/PMC9150762/ /pubmed/35642218 http://dx.doi.org/10.1016/j.ifacol.2021.11.197 Text en https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the CC BY-NC-ND license (https://creativecommons.org/licenses/by-nc-nd/4.0/) |
spellingShingle | Article Godoy, Boris I. Vickers, Nicholas A. Andersson, Sean B. Model Segmentation in Single Particle Tracking |
title | Model Segmentation in Single Particle Tracking |
title_full | Model Segmentation in Single Particle Tracking |
title_fullStr | Model Segmentation in Single Particle Tracking |
title_full_unstemmed | Model Segmentation in Single Particle Tracking |
title_short | Model Segmentation in Single Particle Tracking |
title_sort | model segmentation in single particle tracking |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9150762/ https://www.ncbi.nlm.nih.gov/pubmed/35642218 http://dx.doi.org/10.1016/j.ifacol.2021.11.197 |
work_keys_str_mv | AT godoyborisi modelsegmentationinsingleparticletracking AT vickersnicholasa modelsegmentationinsingleparticletracking AT anderssonseanb modelsegmentationinsingleparticletracking |