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The genome sequence of the lesser marbled fritillary, Brenthis ino, and evidence for a segregating neo-Z chromosome

The lesser marbled fritillary, Brenthis ino (Rottemburg, 1775), is a species of Palearctic butterfly. Male Brenthis ino individuals have been reported to have between 12 and 14 pairs of chromosomes, a much-reduced chromosome number than is typical in butterflies. Here, we present a chromosome-level...

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Autores principales: Mackintosh, Alexander, Laetsch, Dominik R, Baril, Tobias, Foster, Robert G, Dincă, Vlad, Vila, Roger, Hayward, Alexander, Lohse, Konrad
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9157119/
https://www.ncbi.nlm.nih.gov/pubmed/35348678
http://dx.doi.org/10.1093/g3journal/jkac069
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author Mackintosh, Alexander
Laetsch, Dominik R
Baril, Tobias
Foster, Robert G
Dincă, Vlad
Vila, Roger
Hayward, Alexander
Lohse, Konrad
author_facet Mackintosh, Alexander
Laetsch, Dominik R
Baril, Tobias
Foster, Robert G
Dincă, Vlad
Vila, Roger
Hayward, Alexander
Lohse, Konrad
author_sort Mackintosh, Alexander
collection PubMed
description The lesser marbled fritillary, Brenthis ino (Rottemburg, 1775), is a species of Palearctic butterfly. Male Brenthis ino individuals have been reported to have between 12 and 14 pairs of chromosomes, a much-reduced chromosome number than is typical in butterflies. Here, we present a chromosome-level genome assembly for Brenthis ino, as well as gene and transposable element annotations. The assembly is 411.8 Mb in length with a contig N50 of 9.6 Mb and a scaffold N50 of 29.5 Mb. We also show evidence that the male individual from which we generated HiC data was heterozygous for a neo-Z chromosome, consistent with inheriting 14 chromosomes from one parent and 13 from the other. This genome assembly will be a valuable resource for studying chromosome evolution in Lepidoptera, as well as for comparative and population genomics more generally.
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spelling pubmed-91571192022-06-04 The genome sequence of the lesser marbled fritillary, Brenthis ino, and evidence for a segregating neo-Z chromosome Mackintosh, Alexander Laetsch, Dominik R Baril, Tobias Foster, Robert G Dincă, Vlad Vila, Roger Hayward, Alexander Lohse, Konrad G3 (Bethesda) Genome Report The lesser marbled fritillary, Brenthis ino (Rottemburg, 1775), is a species of Palearctic butterfly. Male Brenthis ino individuals have been reported to have between 12 and 14 pairs of chromosomes, a much-reduced chromosome number than is typical in butterflies. Here, we present a chromosome-level genome assembly for Brenthis ino, as well as gene and transposable element annotations. The assembly is 411.8 Mb in length with a contig N50 of 9.6 Mb and a scaffold N50 of 29.5 Mb. We also show evidence that the male individual from which we generated HiC data was heterozygous for a neo-Z chromosome, consistent with inheriting 14 chromosomes from one parent and 13 from the other. This genome assembly will be a valuable resource for studying chromosome evolution in Lepidoptera, as well as for comparative and population genomics more generally. Oxford University Press 2022-03-28 /pmc/articles/PMC9157119/ /pubmed/35348678 http://dx.doi.org/10.1093/g3journal/jkac069 Text en © The Author(s) 2022. Published by Oxford University Press on behalf of Genetics Society of America. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Genome Report
Mackintosh, Alexander
Laetsch, Dominik R
Baril, Tobias
Foster, Robert G
Dincă, Vlad
Vila, Roger
Hayward, Alexander
Lohse, Konrad
The genome sequence of the lesser marbled fritillary, Brenthis ino, and evidence for a segregating neo-Z chromosome
title The genome sequence of the lesser marbled fritillary, Brenthis ino, and evidence for a segregating neo-Z chromosome
title_full The genome sequence of the lesser marbled fritillary, Brenthis ino, and evidence for a segregating neo-Z chromosome
title_fullStr The genome sequence of the lesser marbled fritillary, Brenthis ino, and evidence for a segregating neo-Z chromosome
title_full_unstemmed The genome sequence of the lesser marbled fritillary, Brenthis ino, and evidence for a segregating neo-Z chromosome
title_short The genome sequence of the lesser marbled fritillary, Brenthis ino, and evidence for a segregating neo-Z chromosome
title_sort genome sequence of the lesser marbled fritillary, brenthis ino, and evidence for a segregating neo-z chromosome
topic Genome Report
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9157119/
https://www.ncbi.nlm.nih.gov/pubmed/35348678
http://dx.doi.org/10.1093/g3journal/jkac069
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