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Physiological and biochemical characterization and genome analysis of Rhodococcus qingshengii strain 7B capable of crude oil degradation and plant stimulation

Rhodococci are typical soil inhabitants which take part in remediation of soil polluted with hydrocarbons. In this paper, we describe a new strain, Rhodococcus qingshengii 7B, which is capable of growth and hydrocarbon degradation at 45°C and in the presence of up to 10% NaCl in the medium. The geno...

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Autores principales: Iminova, Leila, Delegan, Yanina, Frantsuzova, Ekaterina, Bogun, Alexander, Zvonarev, Anton, Suzina, Nataliya, Anbumani, Sadasivam, Solyanikova, Inna
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9157199/
https://www.ncbi.nlm.nih.gov/pubmed/35665370
http://dx.doi.org/10.1016/j.btre.2022.e00741
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author Iminova, Leila
Delegan, Yanina
Frantsuzova, Ekaterina
Bogun, Alexander
Zvonarev, Anton
Suzina, Nataliya
Anbumani, Sadasivam
Solyanikova, Inna
author_facet Iminova, Leila
Delegan, Yanina
Frantsuzova, Ekaterina
Bogun, Alexander
Zvonarev, Anton
Suzina, Nataliya
Anbumani, Sadasivam
Solyanikova, Inna
author_sort Iminova, Leila
collection PubMed
description Rhodococci are typical soil inhabitants which take part in remediation of soil polluted with hydrocarbons. In this paper, we describe a new strain, Rhodococcus qingshengii 7B, which is capable of growth and hydrocarbon degradation at 45°C and in the presence of up to 10% NaCl in the medium. The genome of the 7B strain consists of a 6,278,280 bp chromosome and two plasmids. The circular plasmid is 103,992 bp in length. The linear plasmid is 416,450 bp in length. Genome analysis revealed the genes of degradation of various hydrocarbons, resistance to salt stress and plant growth promoting activity. This strain is promising for use in remediation of oil-contaminated soils, because it has a pronounced ability to utilize crude oil, oil sludge and individual hydrocarbons in a wide temperature range. Over 15 days of the experiment, the strain utilized 51% of crude oil at 28°C and 24% at 45 °С.
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spelling pubmed-91571992022-06-02 Physiological and biochemical characterization and genome analysis of Rhodococcus qingshengii strain 7B capable of crude oil degradation and plant stimulation Iminova, Leila Delegan, Yanina Frantsuzova, Ekaterina Bogun, Alexander Zvonarev, Anton Suzina, Nataliya Anbumani, Sadasivam Solyanikova, Inna Biotechnol Rep (Amst) Short Communication Rhodococci are typical soil inhabitants which take part in remediation of soil polluted with hydrocarbons. In this paper, we describe a new strain, Rhodococcus qingshengii 7B, which is capable of growth and hydrocarbon degradation at 45°C and in the presence of up to 10% NaCl in the medium. The genome of the 7B strain consists of a 6,278,280 bp chromosome and two plasmids. The circular plasmid is 103,992 bp in length. The linear plasmid is 416,450 bp in length. Genome analysis revealed the genes of degradation of various hydrocarbons, resistance to salt stress and plant growth promoting activity. This strain is promising for use in remediation of oil-contaminated soils, because it has a pronounced ability to utilize crude oil, oil sludge and individual hydrocarbons in a wide temperature range. Over 15 days of the experiment, the strain utilized 51% of crude oil at 28°C and 24% at 45 °С. Elsevier 2022-05-21 /pmc/articles/PMC9157199/ /pubmed/35665370 http://dx.doi.org/10.1016/j.btre.2022.e00741 Text en © 2022 The Authors. Published by Elsevier B.V. https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Short Communication
Iminova, Leila
Delegan, Yanina
Frantsuzova, Ekaterina
Bogun, Alexander
Zvonarev, Anton
Suzina, Nataliya
Anbumani, Sadasivam
Solyanikova, Inna
Physiological and biochemical characterization and genome analysis of Rhodococcus qingshengii strain 7B capable of crude oil degradation and plant stimulation
title Physiological and biochemical characterization and genome analysis of Rhodococcus qingshengii strain 7B capable of crude oil degradation and plant stimulation
title_full Physiological and biochemical characterization and genome analysis of Rhodococcus qingshengii strain 7B capable of crude oil degradation and plant stimulation
title_fullStr Physiological and biochemical characterization and genome analysis of Rhodococcus qingshengii strain 7B capable of crude oil degradation and plant stimulation
title_full_unstemmed Physiological and biochemical characterization and genome analysis of Rhodococcus qingshengii strain 7B capable of crude oil degradation and plant stimulation
title_short Physiological and biochemical characterization and genome analysis of Rhodococcus qingshengii strain 7B capable of crude oil degradation and plant stimulation
title_sort physiological and biochemical characterization and genome analysis of rhodococcus qingshengii strain 7b capable of crude oil degradation and plant stimulation
topic Short Communication
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9157199/
https://www.ncbi.nlm.nih.gov/pubmed/35665370
http://dx.doi.org/10.1016/j.btre.2022.e00741
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