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A Borrelia burgdorferi outer surface protein C (OspC) genotyping method using Luminex technology

Borrelia burgdorferi is an important tickborne human pathogen comprising several strains based on nucleotide sequence of the outer surface protein C (ospC) gene. Detection and characterization of different ospC genotypes is vital for research on B. burgdorferi and the risk it poses to humans. Here w...

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Autores principales: Pearson, Patrick, Skaltsis, Olivia, Luo, Chu-Yuan, Xu, Guang, Oppler, Zachary, Brisson, Dustin, Rich, Stephen M.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9159548/
https://www.ncbi.nlm.nih.gov/pubmed/35648767
http://dx.doi.org/10.1371/journal.pone.0269266
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author Pearson, Patrick
Skaltsis, Olivia
Luo, Chu-Yuan
Xu, Guang
Oppler, Zachary
Brisson, Dustin
Rich, Stephen M.
author_facet Pearson, Patrick
Skaltsis, Olivia
Luo, Chu-Yuan
Xu, Guang
Oppler, Zachary
Brisson, Dustin
Rich, Stephen M.
author_sort Pearson, Patrick
collection PubMed
description Borrelia burgdorferi is an important tickborne human pathogen comprising several strains based on nucleotide sequence of the outer surface protein C (ospC) gene. Detection and characterization of different ospC genotypes is vital for research on B. burgdorferi and the risk it poses to humans. Here we present a novel, multiplex assay based on Luminex xMAP technology for the detection of B. burgdorferi ospC genotypes. The assay has five major steps: amplification of the ospC gene, hydrolyzation of surplus primers and nucleotides, incorporation of biotinylated nucleotides into the template DNA, hybridization to Luminex microspheres, and detection of fluorescent signals corresponding to each ospC genotype. We validated the protocol by comparing results obtained from our method against results from an established ospC genotyping method. This protocol can be used for the characterization of ospC genotypes in B. burgdorferi infected ticks, reservoir hosts, and/or clinical samples.
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spelling pubmed-91595482022-06-02 A Borrelia burgdorferi outer surface protein C (OspC) genotyping method using Luminex technology Pearson, Patrick Skaltsis, Olivia Luo, Chu-Yuan Xu, Guang Oppler, Zachary Brisson, Dustin Rich, Stephen M. PLoS One Lab Protocol Borrelia burgdorferi is an important tickborne human pathogen comprising several strains based on nucleotide sequence of the outer surface protein C (ospC) gene. Detection and characterization of different ospC genotypes is vital for research on B. burgdorferi and the risk it poses to humans. Here we present a novel, multiplex assay based on Luminex xMAP technology for the detection of B. burgdorferi ospC genotypes. The assay has five major steps: amplification of the ospC gene, hydrolyzation of surplus primers and nucleotides, incorporation of biotinylated nucleotides into the template DNA, hybridization to Luminex microspheres, and detection of fluorescent signals corresponding to each ospC genotype. We validated the protocol by comparing results obtained from our method against results from an established ospC genotyping method. This protocol can be used for the characterization of ospC genotypes in B. burgdorferi infected ticks, reservoir hosts, and/or clinical samples. Public Library of Science 2022-06-01 /pmc/articles/PMC9159548/ /pubmed/35648767 http://dx.doi.org/10.1371/journal.pone.0269266 Text en © 2022 Pearson et al https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Lab Protocol
Pearson, Patrick
Skaltsis, Olivia
Luo, Chu-Yuan
Xu, Guang
Oppler, Zachary
Brisson, Dustin
Rich, Stephen M.
A Borrelia burgdorferi outer surface protein C (OspC) genotyping method using Luminex technology
title A Borrelia burgdorferi outer surface protein C (OspC) genotyping method using Luminex technology
title_full A Borrelia burgdorferi outer surface protein C (OspC) genotyping method using Luminex technology
title_fullStr A Borrelia burgdorferi outer surface protein C (OspC) genotyping method using Luminex technology
title_full_unstemmed A Borrelia burgdorferi outer surface protein C (OspC) genotyping method using Luminex technology
title_short A Borrelia burgdorferi outer surface protein C (OspC) genotyping method using Luminex technology
title_sort borrelia burgdorferi outer surface protein c (ospc) genotyping method using luminex technology
topic Lab Protocol
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9159548/
https://www.ncbi.nlm.nih.gov/pubmed/35648767
http://dx.doi.org/10.1371/journal.pone.0269266
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