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Brain tumor image generation using an aggregation of GAN models with style transfer
In the recent past, deep learning-based models have achieved tremendous success in computer vision-related tasks with the help of large-scale annotated datasets. An interesting application of deep learning is synthetic data generation, especially in the domain of medical image analysis. The need for...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Nature Publishing Group UK
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9160042/ https://www.ncbi.nlm.nih.gov/pubmed/35650252 http://dx.doi.org/10.1038/s41598-022-12646-y |
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author | Mukherkjee, Debadyuti Saha, Pritam Kaplun, Dmitry Sinitca, Aleksandr Sarkar, Ram |
author_facet | Mukherkjee, Debadyuti Saha, Pritam Kaplun, Dmitry Sinitca, Aleksandr Sarkar, Ram |
author_sort | Mukherkjee, Debadyuti |
collection | PubMed |
description | In the recent past, deep learning-based models have achieved tremendous success in computer vision-related tasks with the help of large-scale annotated datasets. An interesting application of deep learning is synthetic data generation, especially in the domain of medical image analysis. The need for such a task arises due to the scarcity of original data. Class imbalance is another reason for applying data augmentation techniques. Generative Adversarial Networks (GANs) are beneficial for synthetic image generation in various fields. However, stand-alone GANs may only fetch the localized features in the latent representation of an image, whereas combining different GANs might understand the distributed features. To this end, we have proposed AGGrGAN, an aggregation of three base GAN models—two variants of Deep Convolutional Generative Adversarial Network (DCGAN) and a Wasserstein GAN (WGAN) to generate synthetic MRI scans of brain tumors. Further, we have applied the style transfer technique to enhance the image resemblance. Our proposed model efficiently overcomes the limitation of data unavailability and can understand the information variance in multiple representations of the raw images. We have conducted all the experiments on the two publicly available datasets - the brain tumor dataset and the Multimodal Brain Tumor Segmentation Challenge (BraTS) 2020 dataset. Results show that the proposed model can generate fine-quality images with maximum Structural Similarity Index Measure (SSIM) scores of 0.57 and 0.83 on the said two datasets. |
format | Online Article Text |
id | pubmed-9160042 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-91600422022-06-03 Brain tumor image generation using an aggregation of GAN models with style transfer Mukherkjee, Debadyuti Saha, Pritam Kaplun, Dmitry Sinitca, Aleksandr Sarkar, Ram Sci Rep Article In the recent past, deep learning-based models have achieved tremendous success in computer vision-related tasks with the help of large-scale annotated datasets. An interesting application of deep learning is synthetic data generation, especially in the domain of medical image analysis. The need for such a task arises due to the scarcity of original data. Class imbalance is another reason for applying data augmentation techniques. Generative Adversarial Networks (GANs) are beneficial for synthetic image generation in various fields. However, stand-alone GANs may only fetch the localized features in the latent representation of an image, whereas combining different GANs might understand the distributed features. To this end, we have proposed AGGrGAN, an aggregation of three base GAN models—two variants of Deep Convolutional Generative Adversarial Network (DCGAN) and a Wasserstein GAN (WGAN) to generate synthetic MRI scans of brain tumors. Further, we have applied the style transfer technique to enhance the image resemblance. Our proposed model efficiently overcomes the limitation of data unavailability and can understand the information variance in multiple representations of the raw images. We have conducted all the experiments on the two publicly available datasets - the brain tumor dataset and the Multimodal Brain Tumor Segmentation Challenge (BraTS) 2020 dataset. Results show that the proposed model can generate fine-quality images with maximum Structural Similarity Index Measure (SSIM) scores of 0.57 and 0.83 on the said two datasets. Nature Publishing Group UK 2022-06-01 /pmc/articles/PMC9160042/ /pubmed/35650252 http://dx.doi.org/10.1038/s41598-022-12646-y Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Article Mukherkjee, Debadyuti Saha, Pritam Kaplun, Dmitry Sinitca, Aleksandr Sarkar, Ram Brain tumor image generation using an aggregation of GAN models with style transfer |
title | Brain tumor image generation using an aggregation of GAN models with style transfer |
title_full | Brain tumor image generation using an aggregation of GAN models with style transfer |
title_fullStr | Brain tumor image generation using an aggregation of GAN models with style transfer |
title_full_unstemmed | Brain tumor image generation using an aggregation of GAN models with style transfer |
title_short | Brain tumor image generation using an aggregation of GAN models with style transfer |
title_sort | brain tumor image generation using an aggregation of gan models with style transfer |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9160042/ https://www.ncbi.nlm.nih.gov/pubmed/35650252 http://dx.doi.org/10.1038/s41598-022-12646-y |
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