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Brain tumor image generation using an aggregation of GAN models with style transfer

In the recent past, deep learning-based models have achieved tremendous success in computer vision-related tasks with the help of large-scale annotated datasets. An interesting application of deep learning is synthetic data generation, especially in the domain of medical image analysis. The need for...

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Autores principales: Mukherkjee, Debadyuti, Saha, Pritam, Kaplun, Dmitry, Sinitca, Aleksandr, Sarkar, Ram
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9160042/
https://www.ncbi.nlm.nih.gov/pubmed/35650252
http://dx.doi.org/10.1038/s41598-022-12646-y
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author Mukherkjee, Debadyuti
Saha, Pritam
Kaplun, Dmitry
Sinitca, Aleksandr
Sarkar, Ram
author_facet Mukherkjee, Debadyuti
Saha, Pritam
Kaplun, Dmitry
Sinitca, Aleksandr
Sarkar, Ram
author_sort Mukherkjee, Debadyuti
collection PubMed
description In the recent past, deep learning-based models have achieved tremendous success in computer vision-related tasks with the help of large-scale annotated datasets. An interesting application of deep learning is synthetic data generation, especially in the domain of medical image analysis. The need for such a task arises due to the scarcity of original data. Class imbalance is another reason for applying data augmentation techniques. Generative Adversarial Networks (GANs) are beneficial for synthetic image generation in various fields. However, stand-alone GANs may only fetch the localized features in the latent representation of an image, whereas combining different GANs might understand the distributed features. To this end, we have proposed AGGrGAN, an aggregation of three base GAN models—two variants of Deep Convolutional Generative Adversarial Network (DCGAN) and a Wasserstein GAN (WGAN) to generate synthetic MRI scans of brain tumors. Further, we have applied the style transfer technique to enhance the image resemblance. Our proposed model efficiently overcomes the limitation of data unavailability and can understand the information variance in multiple representations of the raw images. We have conducted all the experiments on the two publicly available datasets - the brain tumor dataset and the Multimodal Brain Tumor Segmentation Challenge (BraTS) 2020 dataset. Results show that the proposed model can generate fine-quality images with maximum Structural Similarity Index Measure (SSIM) scores of 0.57 and 0.83 on the said two datasets.
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spelling pubmed-91600422022-06-03 Brain tumor image generation using an aggregation of GAN models with style transfer Mukherkjee, Debadyuti Saha, Pritam Kaplun, Dmitry Sinitca, Aleksandr Sarkar, Ram Sci Rep Article In the recent past, deep learning-based models have achieved tremendous success in computer vision-related tasks with the help of large-scale annotated datasets. An interesting application of deep learning is synthetic data generation, especially in the domain of medical image analysis. The need for such a task arises due to the scarcity of original data. Class imbalance is another reason for applying data augmentation techniques. Generative Adversarial Networks (GANs) are beneficial for synthetic image generation in various fields. However, stand-alone GANs may only fetch the localized features in the latent representation of an image, whereas combining different GANs might understand the distributed features. To this end, we have proposed AGGrGAN, an aggregation of three base GAN models—two variants of Deep Convolutional Generative Adversarial Network (DCGAN) and a Wasserstein GAN (WGAN) to generate synthetic MRI scans of brain tumors. Further, we have applied the style transfer technique to enhance the image resemblance. Our proposed model efficiently overcomes the limitation of data unavailability and can understand the information variance in multiple representations of the raw images. We have conducted all the experiments on the two publicly available datasets - the brain tumor dataset and the Multimodal Brain Tumor Segmentation Challenge (BraTS) 2020 dataset. Results show that the proposed model can generate fine-quality images with maximum Structural Similarity Index Measure (SSIM) scores of 0.57 and 0.83 on the said two datasets. Nature Publishing Group UK 2022-06-01 /pmc/articles/PMC9160042/ /pubmed/35650252 http://dx.doi.org/10.1038/s41598-022-12646-y Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Mukherkjee, Debadyuti
Saha, Pritam
Kaplun, Dmitry
Sinitca, Aleksandr
Sarkar, Ram
Brain tumor image generation using an aggregation of GAN models with style transfer
title Brain tumor image generation using an aggregation of GAN models with style transfer
title_full Brain tumor image generation using an aggregation of GAN models with style transfer
title_fullStr Brain tumor image generation using an aggregation of GAN models with style transfer
title_full_unstemmed Brain tumor image generation using an aggregation of GAN models with style transfer
title_short Brain tumor image generation using an aggregation of GAN models with style transfer
title_sort brain tumor image generation using an aggregation of gan models with style transfer
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9160042/
https://www.ncbi.nlm.nih.gov/pubmed/35650252
http://dx.doi.org/10.1038/s41598-022-12646-y
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