Cargando…
Prediction Breast Molecular Typing of Invasive Ductal Carcinoma Based on Dynamic Contrast Enhancement Magnetic Resonance Imaging Radiomics Characteristics: A Feasibility Study
OBJECTIVE: To investigate the feasibility of radiomics in predicting molecular subtype of breast invasive ductal carcinoma (IDC) based on dynamic contrast enhancement magnetic resonance imaging (DCE-MRI). METHODS: A total of 303 cases with pathologically confirmed IDC from January 2018 to March 2021...
Autores principales: | , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2022
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9160981/ https://www.ncbi.nlm.nih.gov/pubmed/35664741 http://dx.doi.org/10.3389/fonc.2022.799232 |
_version_ | 1784719387222081536 |
---|---|
author | Xu, Aqiao Chu, Xiufeng Zhang, Shengjian Zheng, Jing Shi, Dabao Lv, Shasha Li, Feng Weng, Xiaobo |
author_facet | Xu, Aqiao Chu, Xiufeng Zhang, Shengjian Zheng, Jing Shi, Dabao Lv, Shasha Li, Feng Weng, Xiaobo |
author_sort | Xu, Aqiao |
collection | PubMed |
description | OBJECTIVE: To investigate the feasibility of radiomics in predicting molecular subtype of breast invasive ductal carcinoma (IDC) based on dynamic contrast enhancement magnetic resonance imaging (DCE-MRI). METHODS: A total of 303 cases with pathologically confirmed IDC from January 2018 to March 2021 were enrolled in this study, including 223 cases from Fudan University Shanghai Cancer Center (training/test set) and 80 cases from Shaoxing Central Hospital (validation set). All the cases were classified as HR+/Luminal, HER2-enriched, and TNBC according to immunohistochemistry. DCE-MRI original images were treated by semi-automated segmentation to initially extract original and wavelet-transformed radiomic features. The extended logistic regression with least absolute shrinkage and selection operator (LASSO) penalty was applied to identify the optimal radiomic features, which were then used to establish predictive models combined with significant clinical risk factors. Receiver operating characteristic curve (ROC), calibration curve, and decision curve analysis were adopted to evaluate the effectiveness and clinical benefit of the models established. RESULTS: Of the 223 cases from Fudan University Shanghai Cancer Center, HR+/Luminal cancers were diagnosed in 116 cases (52.02%), HER2-enriched in 71 cases (31.84%), and TNBC in 36 cases (16.14%). Based on the training set, 788 radiomic features were extracted in total and 8 optimal features were further identified, including 2 first-order features, 1 gray-level run length matrix (GLRLM), 4 gray-level co-occurrence matrices (GLCM), and 1 3D shape feature. Three multi-class classification models were constructed by extended logistic regression: clinical model (age, menopause, tumor location, Ki-67, histological grade, and lymph node metastasis), radiomic model, and combined model. The macro-average areas under the ROC curve (macro-AUC) for the three models were 0.71, 0.81, and 0.84 in the training set, 0.73, 0.81, and 0.84 in the test set, and 0.76, 0.82, and 0.83 in the validation set, respectively. CONCLUSION: The DCE-MRI-based radiomic features are significant biomarkers for distinguishing molecular subtypes of breast cancer noninvasively. Notably, the classification performance could be improved with the fusion analysis of multi-modal features. |
format | Online Article Text |
id | pubmed-9160981 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-91609812022-06-03 Prediction Breast Molecular Typing of Invasive Ductal Carcinoma Based on Dynamic Contrast Enhancement Magnetic Resonance Imaging Radiomics Characteristics: A Feasibility Study Xu, Aqiao Chu, Xiufeng Zhang, Shengjian Zheng, Jing Shi, Dabao Lv, Shasha Li, Feng Weng, Xiaobo Front Oncol Oncology OBJECTIVE: To investigate the feasibility of radiomics in predicting molecular subtype of breast invasive ductal carcinoma (IDC) based on dynamic contrast enhancement magnetic resonance imaging (DCE-MRI). METHODS: A total of 303 cases with pathologically confirmed IDC from January 2018 to March 2021 were enrolled in this study, including 223 cases from Fudan University Shanghai Cancer Center (training/test set) and 80 cases from Shaoxing Central Hospital (validation set). All the cases were classified as HR+/Luminal, HER2-enriched, and TNBC according to immunohistochemistry. DCE-MRI original images were treated by semi-automated segmentation to initially extract original and wavelet-transformed radiomic features. The extended logistic regression with least absolute shrinkage and selection operator (LASSO) penalty was applied to identify the optimal radiomic features, which were then used to establish predictive models combined with significant clinical risk factors. Receiver operating characteristic curve (ROC), calibration curve, and decision curve analysis were adopted to evaluate the effectiveness and clinical benefit of the models established. RESULTS: Of the 223 cases from Fudan University Shanghai Cancer Center, HR+/Luminal cancers were diagnosed in 116 cases (52.02%), HER2-enriched in 71 cases (31.84%), and TNBC in 36 cases (16.14%). Based on the training set, 788 radiomic features were extracted in total and 8 optimal features were further identified, including 2 first-order features, 1 gray-level run length matrix (GLRLM), 4 gray-level co-occurrence matrices (GLCM), and 1 3D shape feature. Three multi-class classification models were constructed by extended logistic regression: clinical model (age, menopause, tumor location, Ki-67, histological grade, and lymph node metastasis), radiomic model, and combined model. The macro-average areas under the ROC curve (macro-AUC) for the three models were 0.71, 0.81, and 0.84 in the training set, 0.73, 0.81, and 0.84 in the test set, and 0.76, 0.82, and 0.83 in the validation set, respectively. CONCLUSION: The DCE-MRI-based radiomic features are significant biomarkers for distinguishing molecular subtypes of breast cancer noninvasively. Notably, the classification performance could be improved with the fusion analysis of multi-modal features. Frontiers Media S.A. 2022-05-19 /pmc/articles/PMC9160981/ /pubmed/35664741 http://dx.doi.org/10.3389/fonc.2022.799232 Text en Copyright © 2022 Xu, Chu, Zhang, Zheng, Shi, Lv, Li and Weng https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Oncology Xu, Aqiao Chu, Xiufeng Zhang, Shengjian Zheng, Jing Shi, Dabao Lv, Shasha Li, Feng Weng, Xiaobo Prediction Breast Molecular Typing of Invasive Ductal Carcinoma Based on Dynamic Contrast Enhancement Magnetic Resonance Imaging Radiomics Characteristics: A Feasibility Study |
title | Prediction Breast Molecular Typing of Invasive Ductal Carcinoma Based on Dynamic Contrast Enhancement Magnetic Resonance Imaging Radiomics Characteristics: A Feasibility Study |
title_full | Prediction Breast Molecular Typing of Invasive Ductal Carcinoma Based on Dynamic Contrast Enhancement Magnetic Resonance Imaging Radiomics Characteristics: A Feasibility Study |
title_fullStr | Prediction Breast Molecular Typing of Invasive Ductal Carcinoma Based on Dynamic Contrast Enhancement Magnetic Resonance Imaging Radiomics Characteristics: A Feasibility Study |
title_full_unstemmed | Prediction Breast Molecular Typing of Invasive Ductal Carcinoma Based on Dynamic Contrast Enhancement Magnetic Resonance Imaging Radiomics Characteristics: A Feasibility Study |
title_short | Prediction Breast Molecular Typing of Invasive Ductal Carcinoma Based on Dynamic Contrast Enhancement Magnetic Resonance Imaging Radiomics Characteristics: A Feasibility Study |
title_sort | prediction breast molecular typing of invasive ductal carcinoma based on dynamic contrast enhancement magnetic resonance imaging radiomics characteristics: a feasibility study |
topic | Oncology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9160981/ https://www.ncbi.nlm.nih.gov/pubmed/35664741 http://dx.doi.org/10.3389/fonc.2022.799232 |
work_keys_str_mv | AT xuaqiao predictionbreastmoleculartypingofinvasiveductalcarcinomabasedondynamiccontrastenhancementmagneticresonanceimagingradiomicscharacteristicsafeasibilitystudy AT chuxiufeng predictionbreastmoleculartypingofinvasiveductalcarcinomabasedondynamiccontrastenhancementmagneticresonanceimagingradiomicscharacteristicsafeasibilitystudy AT zhangshengjian predictionbreastmoleculartypingofinvasiveductalcarcinomabasedondynamiccontrastenhancementmagneticresonanceimagingradiomicscharacteristicsafeasibilitystudy AT zhengjing predictionbreastmoleculartypingofinvasiveductalcarcinomabasedondynamiccontrastenhancementmagneticresonanceimagingradiomicscharacteristicsafeasibilitystudy AT shidabao predictionbreastmoleculartypingofinvasiveductalcarcinomabasedondynamiccontrastenhancementmagneticresonanceimagingradiomicscharacteristicsafeasibilitystudy AT lvshasha predictionbreastmoleculartypingofinvasiveductalcarcinomabasedondynamiccontrastenhancementmagneticresonanceimagingradiomicscharacteristicsafeasibilitystudy AT lifeng predictionbreastmoleculartypingofinvasiveductalcarcinomabasedondynamiccontrastenhancementmagneticresonanceimagingradiomicscharacteristicsafeasibilitystudy AT wengxiaobo predictionbreastmoleculartypingofinvasiveductalcarcinomabasedondynamiccontrastenhancementmagneticresonanceimagingradiomicscharacteristicsafeasibilitystudy |