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Emergence of bla(NDM– 1)-Carrying Aeromonas caviae K433 Isolated From Patient With Community-Acquired Pneumonia
To demonstrate the detailed genetic characteristics of a bla(NDM–1)-carrying multidrug-resistant Aeromonas caviae strain, the complete genome of the A. caviae strain K433 was sequenced by Illumina HiSeq and Oxford nanopore platforms, and mobile genetic elements associated with antibiotic resistance...
Autores principales: | , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Frontiers Media S.A.
2022
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9161076/ https://www.ncbi.nlm.nih.gov/pubmed/35663877 http://dx.doi.org/10.3389/fmicb.2022.825389 |
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author | Luo, Xinhua Mu, Kai Zhao, Yujie Zhang, Jin Qu, Ying Hu, Dakang Jia, Yifan Dai, Piaopiao Weng, Jian Wang, Dongguo Yu, Lianhua |
author_facet | Luo, Xinhua Mu, Kai Zhao, Yujie Zhang, Jin Qu, Ying Hu, Dakang Jia, Yifan Dai, Piaopiao Weng, Jian Wang, Dongguo Yu, Lianhua |
author_sort | Luo, Xinhua |
collection | PubMed |
description | To demonstrate the detailed genetic characteristics of a bla(NDM–1)-carrying multidrug-resistant Aeromonas caviae strain, the complete genome of the A. caviae strain K433 was sequenced by Illumina HiSeq and Oxford nanopore platforms, and mobile genetic elements associated with antibiotic resistance genes were analyzed by a series of bioinformatics methods. A. caviae K433 which was determined to produce class B carbapenemase, was resistant to most antibiotics tested except amikacin. The genome of K433 consisted of a chromosome cK433 (6,482-kb length) and two plasmids: pK433-qnrS (7.212-kb length) and pK433-NDM (200.855-kb length), the last being the first investigated bla(NDM)-carrying plasmid from Aeromonas spp. By comparison of the backbone and MDR regions from the plasmids studied, they involved a highly homologous sequence structure. This study provides in-depth genetic insights into the plasmids integrated with bla(NDM)-carrying genetic elements from Aeromonas spp. |
format | Online Article Text |
id | pubmed-9161076 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-91610762022-06-03 Emergence of bla(NDM– 1)-Carrying Aeromonas caviae K433 Isolated From Patient With Community-Acquired Pneumonia Luo, Xinhua Mu, Kai Zhao, Yujie Zhang, Jin Qu, Ying Hu, Dakang Jia, Yifan Dai, Piaopiao Weng, Jian Wang, Dongguo Yu, Lianhua Front Microbiol Microbiology To demonstrate the detailed genetic characteristics of a bla(NDM–1)-carrying multidrug-resistant Aeromonas caviae strain, the complete genome of the A. caviae strain K433 was sequenced by Illumina HiSeq and Oxford nanopore platforms, and mobile genetic elements associated with antibiotic resistance genes were analyzed by a series of bioinformatics methods. A. caviae K433 which was determined to produce class B carbapenemase, was resistant to most antibiotics tested except amikacin. The genome of K433 consisted of a chromosome cK433 (6,482-kb length) and two plasmids: pK433-qnrS (7.212-kb length) and pK433-NDM (200.855-kb length), the last being the first investigated bla(NDM)-carrying plasmid from Aeromonas spp. By comparison of the backbone and MDR regions from the plasmids studied, they involved a highly homologous sequence structure. This study provides in-depth genetic insights into the plasmids integrated with bla(NDM)-carrying genetic elements from Aeromonas spp. Frontiers Media S.A. 2022-05-19 /pmc/articles/PMC9161076/ /pubmed/35663877 http://dx.doi.org/10.3389/fmicb.2022.825389 Text en Copyright © 2022 Luo, Mu, Zhao, Zhang, Qu, Hu, Jia, Dai, Weng, Wang and Yu. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Microbiology Luo, Xinhua Mu, Kai Zhao, Yujie Zhang, Jin Qu, Ying Hu, Dakang Jia, Yifan Dai, Piaopiao Weng, Jian Wang, Dongguo Yu, Lianhua Emergence of bla(NDM– 1)-Carrying Aeromonas caviae K433 Isolated From Patient With Community-Acquired Pneumonia |
title | Emergence of bla(NDM– 1)-Carrying Aeromonas caviae K433 Isolated From Patient With Community-Acquired Pneumonia |
title_full | Emergence of bla(NDM– 1)-Carrying Aeromonas caviae K433 Isolated From Patient With Community-Acquired Pneumonia |
title_fullStr | Emergence of bla(NDM– 1)-Carrying Aeromonas caviae K433 Isolated From Patient With Community-Acquired Pneumonia |
title_full_unstemmed | Emergence of bla(NDM– 1)-Carrying Aeromonas caviae K433 Isolated From Patient With Community-Acquired Pneumonia |
title_short | Emergence of bla(NDM– 1)-Carrying Aeromonas caviae K433 Isolated From Patient With Community-Acquired Pneumonia |
title_sort | emergence of bla(ndm– 1)-carrying aeromonas caviae k433 isolated from patient with community-acquired pneumonia |
topic | Microbiology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9161076/ https://www.ncbi.nlm.nih.gov/pubmed/35663877 http://dx.doi.org/10.3389/fmicb.2022.825389 |
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