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Fusion of a proline-rich oligopeptide to the C-terminus of a ruminal xylanase improves catalytic efficiency

Xylanases are widely used in the degradation of lignocellulose and are important industrial enzymes. Therefore, increasing the catalytic activity of xylanases can improve their efficiency and performance. In this study, we introduced the C-terminal proline-rich oligopeptide of the rumen-derived XynA...

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Autores principales: Dong, Ruyue, Liu, Xiaoqing, Wang, Yaru, Qin, Xing, Wang, Xiaolu, Zhang, Honglian, Wang, Yuan, Luo, Huiying, Yao, Bin, Bai, Yingguo, Tu, Tao
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9161913/
https://www.ncbi.nlm.nih.gov/pubmed/35441569
http://dx.doi.org/10.1080/21655979.2022.2061290
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author Dong, Ruyue
Liu, Xiaoqing
Wang, Yaru
Qin, Xing
Wang, Xiaolu
Zhang, Honglian
Wang, Yuan
Luo, Huiying
Yao, Bin
Bai, Yingguo
Tu, Tao
author_facet Dong, Ruyue
Liu, Xiaoqing
Wang, Yaru
Qin, Xing
Wang, Xiaolu
Zhang, Honglian
Wang, Yuan
Luo, Huiying
Yao, Bin
Bai, Yingguo
Tu, Tao
author_sort Dong, Ruyue
collection PubMed
description Xylanases are widely used in the degradation of lignocellulose and are important industrial enzymes. Therefore, increasing the catalytic activity of xylanases can improve their efficiency and performance. In this study, we introduced the C-terminal proline-rich oligopeptide of the rumen-derived XynA into XylR, a GH10 family xylanase. The optimum temperature and pH of the fused enzyme (XylR-Fu) were consistent with those of XylR; however, its catalytic efficiency was 2.48-fold higher than that of XylR. Although the proline-rich oligopeptide did not change the enzyme hydrolysis mode, the amount of oligosaccharides released from beechwood xylan by XylR-Fu was 17% higher than that released by XylR. This increase may be due to the abundance of proline in the oligopeptide, which plays an important role in substrate binding. Furthermore, circular dichroism analysis indicated that the proline-rich oligopeptide might increase the rigidity of the overall structure, thereby enhancing the affinity to the substrate and catalytic activity of the enzyme. Our study shows that the proline-rich oligopeptide enhances the catalytic efficiency of GH10 xylanases and provides a better understanding of the C-terminal oligopeptide-function relationships. This knowledge can guide the rational design of GH10 xylanases to improve their catalytic activity and provides clues for further applications of xylanases in industry.
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spelling pubmed-91619132022-06-03 Fusion of a proline-rich oligopeptide to the C-terminus of a ruminal xylanase improves catalytic efficiency Dong, Ruyue Liu, Xiaoqing Wang, Yaru Qin, Xing Wang, Xiaolu Zhang, Honglian Wang, Yuan Luo, Huiying Yao, Bin Bai, Yingguo Tu, Tao Bioengineered Research Paper Xylanases are widely used in the degradation of lignocellulose and are important industrial enzymes. Therefore, increasing the catalytic activity of xylanases can improve their efficiency and performance. In this study, we introduced the C-terminal proline-rich oligopeptide of the rumen-derived XynA into XylR, a GH10 family xylanase. The optimum temperature and pH of the fused enzyme (XylR-Fu) were consistent with those of XylR; however, its catalytic efficiency was 2.48-fold higher than that of XylR. Although the proline-rich oligopeptide did not change the enzyme hydrolysis mode, the amount of oligosaccharides released from beechwood xylan by XylR-Fu was 17% higher than that released by XylR. This increase may be due to the abundance of proline in the oligopeptide, which plays an important role in substrate binding. Furthermore, circular dichroism analysis indicated that the proline-rich oligopeptide might increase the rigidity of the overall structure, thereby enhancing the affinity to the substrate and catalytic activity of the enzyme. Our study shows that the proline-rich oligopeptide enhances the catalytic efficiency of GH10 xylanases and provides a better understanding of the C-terminal oligopeptide-function relationships. This knowledge can guide the rational design of GH10 xylanases to improve their catalytic activity and provides clues for further applications of xylanases in industry. Taylor & Francis 2022-04-20 /pmc/articles/PMC9161913/ /pubmed/35441569 http://dx.doi.org/10.1080/21655979.2022.2061290 Text en © 2022 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Paper
Dong, Ruyue
Liu, Xiaoqing
Wang, Yaru
Qin, Xing
Wang, Xiaolu
Zhang, Honglian
Wang, Yuan
Luo, Huiying
Yao, Bin
Bai, Yingguo
Tu, Tao
Fusion of a proline-rich oligopeptide to the C-terminus of a ruminal xylanase improves catalytic efficiency
title Fusion of a proline-rich oligopeptide to the C-terminus of a ruminal xylanase improves catalytic efficiency
title_full Fusion of a proline-rich oligopeptide to the C-terminus of a ruminal xylanase improves catalytic efficiency
title_fullStr Fusion of a proline-rich oligopeptide to the C-terminus of a ruminal xylanase improves catalytic efficiency
title_full_unstemmed Fusion of a proline-rich oligopeptide to the C-terminus of a ruminal xylanase improves catalytic efficiency
title_short Fusion of a proline-rich oligopeptide to the C-terminus of a ruminal xylanase improves catalytic efficiency
title_sort fusion of a proline-rich oligopeptide to the c-terminus of a ruminal xylanase improves catalytic efficiency
topic Research Paper
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9161913/
https://www.ncbi.nlm.nih.gov/pubmed/35441569
http://dx.doi.org/10.1080/21655979.2022.2061290
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