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Complete mitochondrial genome of Episymploce splendens (Blattodea: Ectobiidae): A large intergenic spacer and lacking of two tRNA genes

The complete mitochondrial genome of Episymploce splendens, 15,802 bp in length, was determined and annotated in this study. The mito-genome included 13 PCGs, 20 tRNAs and 2 rRNAs. Unlike most typical mito-genomes with conservative gene arrangement and exceptional economic organization, E. splendens...

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Autores principales: Yan, Lin, Hou, Zhenzhen, Ma, Jinnan, Wang, Hongmei, Gao, Jie, Zeng, Chenjuan, Chen, Qin, Yue, Bisong, Zhang, Xiuyue
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9162313/
https://www.ncbi.nlm.nih.gov/pubmed/35653382
http://dx.doi.org/10.1371/journal.pone.0268064
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author Yan, Lin
Hou, Zhenzhen
Ma, Jinnan
Wang, Hongmei
Gao, Jie
Zeng, Chenjuan
Chen, Qin
Yue, Bisong
Zhang, Xiuyue
author_facet Yan, Lin
Hou, Zhenzhen
Ma, Jinnan
Wang, Hongmei
Gao, Jie
Zeng, Chenjuan
Chen, Qin
Yue, Bisong
Zhang, Xiuyue
author_sort Yan, Lin
collection PubMed
description The complete mitochondrial genome of Episymploce splendens, 15,802 bp in length, was determined and annotated in this study. The mito-genome included 13 PCGs, 20 tRNAs and 2 rRNAs. Unlike most typical mito-genomes with conservative gene arrangement and exceptional economic organization, E. splendens mito-genome has two tRNAs (tRNA-Gln and tRNA-Met) absence and a long intergenic spacer sequence (93 bp) between tRNA-Val and srRNA, showing the diversified features of insect mito-genomes. This is the first report of the tRNAs deletion in blattarian mito-genomes and we supported the duplication/random loss model as the origin mechanism of the long intergenic spacer. Two Numts, Numt-1 (557 bp) and Numt-2 (975 bp) transferred to the nucleus at about 14.15 Ma to 22.34 Ma, and 19.19 Ma to 24.06 Ma respectively, were found in E. splendens. They can be used as molecular fossils in insect phylogenetic relationship inference. Our study provided useful data for further studies on the evolution of insect mito-genome.
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spelling pubmed-91623132022-06-03 Complete mitochondrial genome of Episymploce splendens (Blattodea: Ectobiidae): A large intergenic spacer and lacking of two tRNA genes Yan, Lin Hou, Zhenzhen Ma, Jinnan Wang, Hongmei Gao, Jie Zeng, Chenjuan Chen, Qin Yue, Bisong Zhang, Xiuyue PLoS One Research Article The complete mitochondrial genome of Episymploce splendens, 15,802 bp in length, was determined and annotated in this study. The mito-genome included 13 PCGs, 20 tRNAs and 2 rRNAs. Unlike most typical mito-genomes with conservative gene arrangement and exceptional economic organization, E. splendens mito-genome has two tRNAs (tRNA-Gln and tRNA-Met) absence and a long intergenic spacer sequence (93 bp) between tRNA-Val and srRNA, showing the diversified features of insect mito-genomes. This is the first report of the tRNAs deletion in blattarian mito-genomes and we supported the duplication/random loss model as the origin mechanism of the long intergenic spacer. Two Numts, Numt-1 (557 bp) and Numt-2 (975 bp) transferred to the nucleus at about 14.15 Ma to 22.34 Ma, and 19.19 Ma to 24.06 Ma respectively, were found in E. splendens. They can be used as molecular fossils in insect phylogenetic relationship inference. Our study provided useful data for further studies on the evolution of insect mito-genome. Public Library of Science 2022-06-02 /pmc/articles/PMC9162313/ /pubmed/35653382 http://dx.doi.org/10.1371/journal.pone.0268064 Text en © 2022 Yan et al https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Yan, Lin
Hou, Zhenzhen
Ma, Jinnan
Wang, Hongmei
Gao, Jie
Zeng, Chenjuan
Chen, Qin
Yue, Bisong
Zhang, Xiuyue
Complete mitochondrial genome of Episymploce splendens (Blattodea: Ectobiidae): A large intergenic spacer and lacking of two tRNA genes
title Complete mitochondrial genome of Episymploce splendens (Blattodea: Ectobiidae): A large intergenic spacer and lacking of two tRNA genes
title_full Complete mitochondrial genome of Episymploce splendens (Blattodea: Ectobiidae): A large intergenic spacer and lacking of two tRNA genes
title_fullStr Complete mitochondrial genome of Episymploce splendens (Blattodea: Ectobiidae): A large intergenic spacer and lacking of two tRNA genes
title_full_unstemmed Complete mitochondrial genome of Episymploce splendens (Blattodea: Ectobiidae): A large intergenic spacer and lacking of two tRNA genes
title_short Complete mitochondrial genome of Episymploce splendens (Blattodea: Ectobiidae): A large intergenic spacer and lacking of two tRNA genes
title_sort complete mitochondrial genome of episymploce splendens (blattodea: ectobiidae): a large intergenic spacer and lacking of two trna genes
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9162313/
https://www.ncbi.nlm.nih.gov/pubmed/35653382
http://dx.doi.org/10.1371/journal.pone.0268064
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