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Identification of the Putative Tumor Suppressor Characteristics of FAM107A via Pan-Cancer Analysis

Family with sequence similarity 107, member A(FAM107A) was supposed as a tumor suppressor for various types of tumors. However, no pan-cancer analysis of FAM107A is available. Therefore, we conducted a FAM107A-related pan-cancer analysis across thirty-three tumors based on TCGA database to explore t...

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Autores principales: Ou, Dehua, Zhang, Zhiqin, Wu, Zesong, Shen, Peilin, Huang, Yichuan, She, Sile, She, Sifan, Lin, Ming-en
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9163664/
https://www.ncbi.nlm.nih.gov/pubmed/35669436
http://dx.doi.org/10.3389/fonc.2022.861281
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author Ou, Dehua
Zhang, Zhiqin
Wu, Zesong
Shen, Peilin
Huang, Yichuan
She, Sile
She, Sifan
Lin, Ming-en
author_facet Ou, Dehua
Zhang, Zhiqin
Wu, Zesong
Shen, Peilin
Huang, Yichuan
She, Sile
She, Sifan
Lin, Ming-en
author_sort Ou, Dehua
collection PubMed
description Family with sequence similarity 107, member A(FAM107A) was supposed as a tumor suppressor for various types of tumors. However, no pan-cancer analysis of FAM107A is available. Therefore, we conducted a FAM107A-related pan-cancer analysis across thirty-three tumors based on TCGA database to explore the molecular characteristics of FAM107A. The FAM107A expression is reduced in most cancers, and its down-regulated expression was linked to poor overall survival and progression-free survival of tumor patients. Analysis of DNA methylation of the FAM107A gene showed a negative correlation between FAM107A expression and promoter methylation in numerous cancers. Furthermore, FAM107A expression was noted to be involved in myeloid-derived suppressor cell infiltration in multiple cancers. To explore the mechanism of FAM107A in cancers, KEGG, and GO enrichment analysis was performed and the result showed “cell adhesion” and “cAMP signaling pathway” terms as the potential impact of FAM107A on cancers. An experiment in vitro showed FAM107A knockdown promoted the proliferation, migration, and invasion of bladder cancer and renal cancer cells. Our study indicates that FAM107A may be a putative tumor suppressor in bladder cancer and other tumors.
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spelling pubmed-91636642022-06-05 Identification of the Putative Tumor Suppressor Characteristics of FAM107A via Pan-Cancer Analysis Ou, Dehua Zhang, Zhiqin Wu, Zesong Shen, Peilin Huang, Yichuan She, Sile She, Sifan Lin, Ming-en Front Oncol Oncology Family with sequence similarity 107, member A(FAM107A) was supposed as a tumor suppressor for various types of tumors. However, no pan-cancer analysis of FAM107A is available. Therefore, we conducted a FAM107A-related pan-cancer analysis across thirty-three tumors based on TCGA database to explore the molecular characteristics of FAM107A. The FAM107A expression is reduced in most cancers, and its down-regulated expression was linked to poor overall survival and progression-free survival of tumor patients. Analysis of DNA methylation of the FAM107A gene showed a negative correlation between FAM107A expression and promoter methylation in numerous cancers. Furthermore, FAM107A expression was noted to be involved in myeloid-derived suppressor cell infiltration in multiple cancers. To explore the mechanism of FAM107A in cancers, KEGG, and GO enrichment analysis was performed and the result showed “cell adhesion” and “cAMP signaling pathway” terms as the potential impact of FAM107A on cancers. An experiment in vitro showed FAM107A knockdown promoted the proliferation, migration, and invasion of bladder cancer and renal cancer cells. Our study indicates that FAM107A may be a putative tumor suppressor in bladder cancer and other tumors. Frontiers Media S.A. 2022-05-20 /pmc/articles/PMC9163664/ /pubmed/35669436 http://dx.doi.org/10.3389/fonc.2022.861281 Text en Copyright © 2022 Ou, Zhang, Wu, Shen, Huang, She, She and Lin https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Oncology
Ou, Dehua
Zhang, Zhiqin
Wu, Zesong
Shen, Peilin
Huang, Yichuan
She, Sile
She, Sifan
Lin, Ming-en
Identification of the Putative Tumor Suppressor Characteristics of FAM107A via Pan-Cancer Analysis
title Identification of the Putative Tumor Suppressor Characteristics of FAM107A via Pan-Cancer Analysis
title_full Identification of the Putative Tumor Suppressor Characteristics of FAM107A via Pan-Cancer Analysis
title_fullStr Identification of the Putative Tumor Suppressor Characteristics of FAM107A via Pan-Cancer Analysis
title_full_unstemmed Identification of the Putative Tumor Suppressor Characteristics of FAM107A via Pan-Cancer Analysis
title_short Identification of the Putative Tumor Suppressor Characteristics of FAM107A via Pan-Cancer Analysis
title_sort identification of the putative tumor suppressor characteristics of fam107a via pan-cancer analysis
topic Oncology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9163664/
https://www.ncbi.nlm.nih.gov/pubmed/35669436
http://dx.doi.org/10.3389/fonc.2022.861281
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