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INSP-14. Novel approaches to molecular diagnostics

The 2021 WHO classification of brain tumors introduces a variety of novel tumor types and subtypes, especially in pediatric neuro-oncology. Most of these tumor types are characterized by specific molecular profiles and alterations. In turn, diagnostic molecular evaluation of brain tumor specimen bec...

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Autor principal: Sahm, Felix
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9164855/
http://dx.doi.org/10.1093/neuonc/noac079.710
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author Sahm, Felix
author_facet Sahm, Felix
author_sort Sahm, Felix
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description The 2021 WHO classification of brain tumors introduces a variety of novel tumor types and subtypes, especially in pediatric neuro-oncology. Most of these tumor types are characterized by specific molecular profiles and alterations. In turn, diagnostic molecular evaluation of brain tumor specimen becomes substantially more complex. The talk will review the basic concepts of the new WHO classification and present novel methodology developments with the respective implications in diagnostic routine. This covers, first, RNA sequencing for fusion detection and expression profiling, highlighting examples of novel tumor types identified by pathognomonic rearrangements. Second, long-read sequencing approaches selecting DNA fragments of interest during sequencing will be discussed. Third, an outlook on the use of artificial intelligence to classify and detect molecular alterations based on H&E staning alone will be provided.
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spelling pubmed-91648552022-06-05 INSP-14. Novel approaches to molecular diagnostics Sahm, Felix Neuro Oncol Invited Speakers The 2021 WHO classification of brain tumors introduces a variety of novel tumor types and subtypes, especially in pediatric neuro-oncology. Most of these tumor types are characterized by specific molecular profiles and alterations. In turn, diagnostic molecular evaluation of brain tumor specimen becomes substantially more complex. The talk will review the basic concepts of the new WHO classification and present novel methodology developments with the respective implications in diagnostic routine. This covers, first, RNA sequencing for fusion detection and expression profiling, highlighting examples of novel tumor types identified by pathognomonic rearrangements. Second, long-read sequencing approaches selecting DNA fragments of interest during sequencing will be discussed. Third, an outlook on the use of artificial intelligence to classify and detect molecular alterations based on H&E staning alone will be provided. Oxford University Press 2022-06-03 /pmc/articles/PMC9164855/ http://dx.doi.org/10.1093/neuonc/noac079.710 Text en © The Author(s) 2022. Published by Oxford University Press on behalf of the Society for Neuro-Oncology. https://creativecommons.org/licenses/by-nc/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution-NonCommercial License (https://creativecommons.org/licenses/by-nc/4.0/), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com
spellingShingle Invited Speakers
Sahm, Felix
INSP-14. Novel approaches to molecular diagnostics
title INSP-14. Novel approaches to molecular diagnostics
title_full INSP-14. Novel approaches to molecular diagnostics
title_fullStr INSP-14. Novel approaches to molecular diagnostics
title_full_unstemmed INSP-14. Novel approaches to molecular diagnostics
title_short INSP-14. Novel approaches to molecular diagnostics
title_sort insp-14. novel approaches to molecular diagnostics
topic Invited Speakers
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9164855/
http://dx.doi.org/10.1093/neuonc/noac079.710
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