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Single-nucleosome imaging reveals steady-state motion of interphase chromatin in living human cells

Dynamic chromatin behavior plays a critical role in various genome functions. However, it remains unclear how chromatin behavior changes during interphase, where the nucleus enlarges and genomic DNA doubles. While the previously reported chromatin movements varied during interphase when measured usi...

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Autores principales: Iida, Shiori, Shinkai, Soya, Itoh, Yuji, Tamura, Sachiko, Kanemaki, Masato T., Onami, Shuichi, Maeshima, Kazuhiro
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Association for the Advancement of Science 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9166292/
https://www.ncbi.nlm.nih.gov/pubmed/35658044
http://dx.doi.org/10.1126/sciadv.abn5626
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author Iida, Shiori
Shinkai, Soya
Itoh, Yuji
Tamura, Sachiko
Kanemaki, Masato T.
Onami, Shuichi
Maeshima, Kazuhiro
author_facet Iida, Shiori
Shinkai, Soya
Itoh, Yuji
Tamura, Sachiko
Kanemaki, Masato T.
Onami, Shuichi
Maeshima, Kazuhiro
author_sort Iida, Shiori
collection PubMed
description Dynamic chromatin behavior plays a critical role in various genome functions. However, it remains unclear how chromatin behavior changes during interphase, where the nucleus enlarges and genomic DNA doubles. While the previously reported chromatin movements varied during interphase when measured using a minute or longer time scale, we unveil that local chromatin motion captured by single-nucleosome imaging/tracking on a second time scale remained steady throughout G(1), S, and G(2) phases in live human cells. This motion mode appeared to change beyond this time scale. A defined genomic region also behaved similarly. Combined with Brownian dynamics modeling, our results suggest that this steady-state chromatin motion was mainly driven by thermal fluctuations. Steady-state motion temporarily increased following a DNA damage response. Our findings support the viscoelastic properties of chromatin. We propose that the observed steady-state chromatin motion allows cells to conduct housekeeping functions, such as transcription and DNA replication, under similar environments during interphase.
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spelling pubmed-91662922022-06-17 Single-nucleosome imaging reveals steady-state motion of interphase chromatin in living human cells Iida, Shiori Shinkai, Soya Itoh, Yuji Tamura, Sachiko Kanemaki, Masato T. Onami, Shuichi Maeshima, Kazuhiro Sci Adv Biomedicine and Life Sciences Dynamic chromatin behavior plays a critical role in various genome functions. However, it remains unclear how chromatin behavior changes during interphase, where the nucleus enlarges and genomic DNA doubles. While the previously reported chromatin movements varied during interphase when measured using a minute or longer time scale, we unveil that local chromatin motion captured by single-nucleosome imaging/tracking on a second time scale remained steady throughout G(1), S, and G(2) phases in live human cells. This motion mode appeared to change beyond this time scale. A defined genomic region also behaved similarly. Combined with Brownian dynamics modeling, our results suggest that this steady-state chromatin motion was mainly driven by thermal fluctuations. Steady-state motion temporarily increased following a DNA damage response. Our findings support the viscoelastic properties of chromatin. We propose that the observed steady-state chromatin motion allows cells to conduct housekeeping functions, such as transcription and DNA replication, under similar environments during interphase. American Association for the Advancement of Science 2022-06-03 /pmc/articles/PMC9166292/ /pubmed/35658044 http://dx.doi.org/10.1126/sciadv.abn5626 Text en Copyright © 2022 The Authors, some rights reserved; exclusive licensee American Association for the Advancement of Science. No claim to original U.S. Government Works. Distributed under a Creative Commons Attribution NonCommercial License 4.0 (CC BY-NC). https://creativecommons.org/licenses/by-nc/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution-NonCommercial license (https://creativecommons.org/licenses/by-nc/4.0/) , which permits use, distribution, and reproduction in any medium, so long as the resultant use is not for commercial advantage and provided the original work is properly cited.
spellingShingle Biomedicine and Life Sciences
Iida, Shiori
Shinkai, Soya
Itoh, Yuji
Tamura, Sachiko
Kanemaki, Masato T.
Onami, Shuichi
Maeshima, Kazuhiro
Single-nucleosome imaging reveals steady-state motion of interphase chromatin in living human cells
title Single-nucleosome imaging reveals steady-state motion of interphase chromatin in living human cells
title_full Single-nucleosome imaging reveals steady-state motion of interphase chromatin in living human cells
title_fullStr Single-nucleosome imaging reveals steady-state motion of interphase chromatin in living human cells
title_full_unstemmed Single-nucleosome imaging reveals steady-state motion of interphase chromatin in living human cells
title_short Single-nucleosome imaging reveals steady-state motion of interphase chromatin in living human cells
title_sort single-nucleosome imaging reveals steady-state motion of interphase chromatin in living human cells
topic Biomedicine and Life Sciences
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9166292/
https://www.ncbi.nlm.nih.gov/pubmed/35658044
http://dx.doi.org/10.1126/sciadv.abn5626
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