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Applicability of polygenic risk scores in endometriosis clinical presentation

BACKGROUND: Risk prediction is an essential part of preventative medicine and in recent years genomic information has become an interesting factor in risk models. Polygenic risk scores (PRS) combine the effect of many genetic variations into a single score which has been shown to have predictive val...

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Autores principales: Svensson, Agnes, Garcia-Etxebarria, Koldo, Åkesson, Anna, Borgfeldt, Christer, Roth, Bodil, Ek, Malin, D’Amato, Mauro, Ohlsson, Bodil
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9166598/
https://www.ncbi.nlm.nih.gov/pubmed/35659226
http://dx.doi.org/10.1186/s12905-022-01788-w
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author Svensson, Agnes
Garcia-Etxebarria, Koldo
Åkesson, Anna
Borgfeldt, Christer
Roth, Bodil
Ek, Malin
D’Amato, Mauro
Ohlsson, Bodil
author_facet Svensson, Agnes
Garcia-Etxebarria, Koldo
Åkesson, Anna
Borgfeldt, Christer
Roth, Bodil
Ek, Malin
D’Amato, Mauro
Ohlsson, Bodil
author_sort Svensson, Agnes
collection PubMed
description BACKGROUND: Risk prediction is an essential part of preventative medicine and in recent years genomic information has become an interesting factor in risk models. Polygenic risk scores (PRS) combine the effect of many genetic variations into a single score which has been shown to have predictive value for many diseases. This study aimed to investigate the association between PRS for endometriosis and the clinical presentation of the disease. METHODS: Women with endometriosis (N = 172) were identified at the Department of Gynecology. All participants answered questionnaires regarding sociodemographic factors, lifestyle habits and medical history, registered bowel symptoms on the Visual Analog Scale for Irritable Bowel Syndrome and passed blood samples. DNA was extracted and samples were genotyped, and a PRS was calculated based on previous genome-wide association studies of endometriosis. Inflammatory proteins and TSH receptor antibodies (TRAb) in serum were analyzed. RESULTS: Inverse associations were identified between PRS and spread of endometriosis, involvement of the gastrointestinal tract and hormone treatment. However, significance was lost when calculated as p for trend and the specificity and sensitivity were low. There were no correlations between PRS and TRAb or inflammatory proteins. CONCLUSION: The findings indicate that specific PRS should be developed to predict clinical presentations in patient with endometriosis. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s12905-022-01788-w.
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spelling pubmed-91665982022-06-05 Applicability of polygenic risk scores in endometriosis clinical presentation Svensson, Agnes Garcia-Etxebarria, Koldo Åkesson, Anna Borgfeldt, Christer Roth, Bodil Ek, Malin D’Amato, Mauro Ohlsson, Bodil BMC Womens Health Research Article BACKGROUND: Risk prediction is an essential part of preventative medicine and in recent years genomic information has become an interesting factor in risk models. Polygenic risk scores (PRS) combine the effect of many genetic variations into a single score which has been shown to have predictive value for many diseases. This study aimed to investigate the association between PRS for endometriosis and the clinical presentation of the disease. METHODS: Women with endometriosis (N = 172) were identified at the Department of Gynecology. All participants answered questionnaires regarding sociodemographic factors, lifestyle habits and medical history, registered bowel symptoms on the Visual Analog Scale for Irritable Bowel Syndrome and passed blood samples. DNA was extracted and samples were genotyped, and a PRS was calculated based on previous genome-wide association studies of endometriosis. Inflammatory proteins and TSH receptor antibodies (TRAb) in serum were analyzed. RESULTS: Inverse associations were identified between PRS and spread of endometriosis, involvement of the gastrointestinal tract and hormone treatment. However, significance was lost when calculated as p for trend and the specificity and sensitivity were low. There were no correlations between PRS and TRAb or inflammatory proteins. CONCLUSION: The findings indicate that specific PRS should be developed to predict clinical presentations in patient with endometriosis. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s12905-022-01788-w. BioMed Central 2022-06-03 /pmc/articles/PMC9166598/ /pubmed/35659226 http://dx.doi.org/10.1186/s12905-022-01788-w Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) ) applies to the data made available in this article, unless otherwise stated in a credit line to the data.
spellingShingle Research Article
Svensson, Agnes
Garcia-Etxebarria, Koldo
Åkesson, Anna
Borgfeldt, Christer
Roth, Bodil
Ek, Malin
D’Amato, Mauro
Ohlsson, Bodil
Applicability of polygenic risk scores in endometriosis clinical presentation
title Applicability of polygenic risk scores in endometriosis clinical presentation
title_full Applicability of polygenic risk scores in endometriosis clinical presentation
title_fullStr Applicability of polygenic risk scores in endometriosis clinical presentation
title_full_unstemmed Applicability of polygenic risk scores in endometriosis clinical presentation
title_short Applicability of polygenic risk scores in endometriosis clinical presentation
title_sort applicability of polygenic risk scores in endometriosis clinical presentation
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9166598/
https://www.ncbi.nlm.nih.gov/pubmed/35659226
http://dx.doi.org/10.1186/s12905-022-01788-w
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