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A novel multi-scale based deep convolutional neural network for detecting COVID-19 from X-rays

The COVID-19 pandemic has posed an unprecedented threat to the global public health system, primarily infecting the airway epithelial cells in the respiratory tract. Chest X-ray (CXR) is widely available, faster, and less expensive therefore it is preferred to monitor the lungs for COVID-19 diagnosi...

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Autores principales: Karnati, Mohan, Seal, Ayan, Sahu, Geet, Yazidi, Anis, Krejcar, Ondrej
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier B.V. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9167691/
https://www.ncbi.nlm.nih.gov/pubmed/35693544
http://dx.doi.org/10.1016/j.asoc.2022.109109
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author Karnati, Mohan
Seal, Ayan
Sahu, Geet
Yazidi, Anis
Krejcar, Ondrej
author_facet Karnati, Mohan
Seal, Ayan
Sahu, Geet
Yazidi, Anis
Krejcar, Ondrej
author_sort Karnati, Mohan
collection PubMed
description The COVID-19 pandemic has posed an unprecedented threat to the global public health system, primarily infecting the airway epithelial cells in the respiratory tract. Chest X-ray (CXR) is widely available, faster, and less expensive therefore it is preferred to monitor the lungs for COVID-19 diagnosis over other techniques such as molecular test, antigen test, antibody test, and chest computed tomography (CT). As the pandemic continues to reveal the limitations of our current ecosystems, researchers are coming together to share their knowledge and experience in order to develop new systems to tackle it. In this work, an end-to-end IoT infrastructure is designed and built to diagnose patients remotely in the case of a pandemic, limiting COVID-19 dissemination while also improving measurement science. The proposed framework comprises six steps. In the last step, a model is designed to interpret CXR images and intelligently measure the severity of COVID-19 lung infections using a novel deep neural network (DNN). The proposed DNN employs multi-scale sampling filters to extract reliable and noise-invariant features from a variety of image patches. Experiments are conducted on five publicly available databases, including COVIDx, COVID-19 Radiography, COVID-XRay-5K, COVID-19-CXR, and COVIDchestxray, with classification accuracies of 96.01%, 99.62%, 99.22%, 98.83%, and 100%, and testing times of 0.541, 0.692, 1.28, 0.461, and 0.202 s, respectively. The obtained results show that the proposed model surpasses fourteen baseline techniques. As a result, the newly developed model could be utilized to evaluate treatment efficacy, particularly in remote locations.
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spelling pubmed-91676912022-06-07 A novel multi-scale based deep convolutional neural network for detecting COVID-19 from X-rays Karnati, Mohan Seal, Ayan Sahu, Geet Yazidi, Anis Krejcar, Ondrej Appl Soft Comput Article The COVID-19 pandemic has posed an unprecedented threat to the global public health system, primarily infecting the airway epithelial cells in the respiratory tract. Chest X-ray (CXR) is widely available, faster, and less expensive therefore it is preferred to monitor the lungs for COVID-19 diagnosis over other techniques such as molecular test, antigen test, antibody test, and chest computed tomography (CT). As the pandemic continues to reveal the limitations of our current ecosystems, researchers are coming together to share their knowledge and experience in order to develop new systems to tackle it. In this work, an end-to-end IoT infrastructure is designed and built to diagnose patients remotely in the case of a pandemic, limiting COVID-19 dissemination while also improving measurement science. The proposed framework comprises six steps. In the last step, a model is designed to interpret CXR images and intelligently measure the severity of COVID-19 lung infections using a novel deep neural network (DNN). The proposed DNN employs multi-scale sampling filters to extract reliable and noise-invariant features from a variety of image patches. Experiments are conducted on five publicly available databases, including COVIDx, COVID-19 Radiography, COVID-XRay-5K, COVID-19-CXR, and COVIDchestxray, with classification accuracies of 96.01%, 99.62%, 99.22%, 98.83%, and 100%, and testing times of 0.541, 0.692, 1.28, 0.461, and 0.202 s, respectively. The obtained results show that the proposed model surpasses fourteen baseline techniques. As a result, the newly developed model could be utilized to evaluate treatment efficacy, particularly in remote locations. Elsevier B.V. 2022-08 2022-06-06 /pmc/articles/PMC9167691/ /pubmed/35693544 http://dx.doi.org/10.1016/j.asoc.2022.109109 Text en © 2022 Elsevier B.V. All rights reserved. Since January 2020 Elsevier has created a COVID-19 resource centre with free information in English and Mandarin on the novel coronavirus COVID-19. The COVID-19 resource centre is hosted on Elsevier Connect, the company's public news and information website. Elsevier hereby grants permission to make all its COVID-19-related research that is available on the COVID-19 resource centre - including this research content - immediately available in PubMed Central and other publicly funded repositories, such as the WHO COVID database with rights for unrestricted research re-use and analyses in any form or by any means with acknowledgement of the original source. These permissions are granted for free by Elsevier for as long as the COVID-19 resource centre remains active.
spellingShingle Article
Karnati, Mohan
Seal, Ayan
Sahu, Geet
Yazidi, Anis
Krejcar, Ondrej
A novel multi-scale based deep convolutional neural network for detecting COVID-19 from X-rays
title A novel multi-scale based deep convolutional neural network for detecting COVID-19 from X-rays
title_full A novel multi-scale based deep convolutional neural network for detecting COVID-19 from X-rays
title_fullStr A novel multi-scale based deep convolutional neural network for detecting COVID-19 from X-rays
title_full_unstemmed A novel multi-scale based deep convolutional neural network for detecting COVID-19 from X-rays
title_short A novel multi-scale based deep convolutional neural network for detecting COVID-19 from X-rays
title_sort novel multi-scale based deep convolutional neural network for detecting covid-19 from x-rays
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9167691/
https://www.ncbi.nlm.nih.gov/pubmed/35693544
http://dx.doi.org/10.1016/j.asoc.2022.109109
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