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Transcriptome Profiling Unveils a Critical Role of IL-17 Signaling-Mediated Inflammation in Radiation-Induced Esophageal Injury in Rats
Elucidation of the molecular mechanisms involving the initiation and progression of radiation-induced esophageal injury (RIEI) is important for prevention and treatment. Despite ongoing advances, the underlying mechanisms controlling RIEI remain largely unknown. In the present study, RNA-seq was per...
Autores principales: | , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
SAGE Publications
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9168911/ https://www.ncbi.nlm.nih.gov/pubmed/35677348 http://dx.doi.org/10.1177/15593258221104609 |
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author | Yao, Jia Zhang, Jinkang Wang, Jinlong Lai, Qian Yuan, Weijun Liu, Zhongyu Cheng, Shuanghua Feng, Yahui Jiang, Zhiqiang Shi, Yuhong Jiang, Sheng Tu, Wenling |
author_facet | Yao, Jia Zhang, Jinkang Wang, Jinlong Lai, Qian Yuan, Weijun Liu, Zhongyu Cheng, Shuanghua Feng, Yahui Jiang, Zhiqiang Shi, Yuhong Jiang, Sheng Tu, Wenling |
author_sort | Yao, Jia |
collection | PubMed |
description | Elucidation of the molecular mechanisms involving the initiation and progression of radiation-induced esophageal injury (RIEI) is important for prevention and treatment. Despite ongoing advances, the underlying mechanisms controlling RIEI remain largely unknown. In the present study, RNA-seq was performed to characterize mRNA profiles of the irradiated rat esophagus exposed to 0, 25, or 35 Gy irradiation. Bioinformatics analyses including dose-dependent differentially expressed genes (DEGs), Gene Ontology (GO), Kyoto Encyclopedia of Gene and Genome (KEGG) pathway, protein-protein interaction (PPI) network, and immune infiltration were performed. 134 DEGs were screened out with a dose-dependent manner (35 Gy > 25 Gy > control, or 35 Gy < 25 Gy < control). GO and KEGG analyses showed that the most significant mechanism was IL-17 signaling-mediated inflammatory response. 5 hub genes, Ccl11, Cxcl3, Il17a, S100a8, and S100a9, were identified through the intersection of the DEGs involved in inflammatory response, IL-17 pathway, and PPI network. Additionally, immune infiltration analysis showed the activation of macrophages, monocytes, T cells, NKT cells, and neutrophils, among which macrophages, monocytes, and neutrophils might be the main sources of S100a8 and S100a9. Thus, these findings further our understanding on the molecular biology of RIEI and may help develop more effective therapeutic strategies. |
format | Online Article Text |
id | pubmed-9168911 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | SAGE Publications |
record_format | MEDLINE/PubMed |
spelling | pubmed-91689112022-06-07 Transcriptome Profiling Unveils a Critical Role of IL-17 Signaling-Mediated Inflammation in Radiation-Induced Esophageal Injury in Rats Yao, Jia Zhang, Jinkang Wang, Jinlong Lai, Qian Yuan, Weijun Liu, Zhongyu Cheng, Shuanghua Feng, Yahui Jiang, Zhiqiang Shi, Yuhong Jiang, Sheng Tu, Wenling Dose Response Original Article Elucidation of the molecular mechanisms involving the initiation and progression of radiation-induced esophageal injury (RIEI) is important for prevention and treatment. Despite ongoing advances, the underlying mechanisms controlling RIEI remain largely unknown. In the present study, RNA-seq was performed to characterize mRNA profiles of the irradiated rat esophagus exposed to 0, 25, or 35 Gy irradiation. Bioinformatics analyses including dose-dependent differentially expressed genes (DEGs), Gene Ontology (GO), Kyoto Encyclopedia of Gene and Genome (KEGG) pathway, protein-protein interaction (PPI) network, and immune infiltration were performed. 134 DEGs were screened out with a dose-dependent manner (35 Gy > 25 Gy > control, or 35 Gy < 25 Gy < control). GO and KEGG analyses showed that the most significant mechanism was IL-17 signaling-mediated inflammatory response. 5 hub genes, Ccl11, Cxcl3, Il17a, S100a8, and S100a9, were identified through the intersection of the DEGs involved in inflammatory response, IL-17 pathway, and PPI network. Additionally, immune infiltration analysis showed the activation of macrophages, monocytes, T cells, NKT cells, and neutrophils, among which macrophages, monocytes, and neutrophils might be the main sources of S100a8 and S100a9. Thus, these findings further our understanding on the molecular biology of RIEI and may help develop more effective therapeutic strategies. SAGE Publications 2022-06-02 /pmc/articles/PMC9168911/ /pubmed/35677348 http://dx.doi.org/10.1177/15593258221104609 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by-nc/4.0/This article is distributed under the terms of the Creative Commons Attribution-NonCommercial 4.0 License (https://creativecommons.org/licenses/by-nc/4.0/) which permits non-commercial use, reproduction and distribution of the work without further permission provided the original work is attributed as specified on the SAGE and Open Access pages (https://us.sagepub.com/en-us/nam/open-access-at-sage). |
spellingShingle | Original Article Yao, Jia Zhang, Jinkang Wang, Jinlong Lai, Qian Yuan, Weijun Liu, Zhongyu Cheng, Shuanghua Feng, Yahui Jiang, Zhiqiang Shi, Yuhong Jiang, Sheng Tu, Wenling Transcriptome Profiling Unveils a Critical Role of IL-17 Signaling-Mediated Inflammation in Radiation-Induced Esophageal Injury in Rats |
title | Transcriptome Profiling Unveils a Critical Role of IL-17
Signaling-Mediated Inflammation in Radiation-Induced Esophageal Injury in
Rats |
title_full | Transcriptome Profiling Unveils a Critical Role of IL-17
Signaling-Mediated Inflammation in Radiation-Induced Esophageal Injury in
Rats |
title_fullStr | Transcriptome Profiling Unveils a Critical Role of IL-17
Signaling-Mediated Inflammation in Radiation-Induced Esophageal Injury in
Rats |
title_full_unstemmed | Transcriptome Profiling Unveils a Critical Role of IL-17
Signaling-Mediated Inflammation in Radiation-Induced Esophageal Injury in
Rats |
title_short | Transcriptome Profiling Unveils a Critical Role of IL-17
Signaling-Mediated Inflammation in Radiation-Induced Esophageal Injury in
Rats |
title_sort | transcriptome profiling unveils a critical role of il-17
signaling-mediated inflammation in radiation-induced esophageal injury in
rats |
topic | Original Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9168911/ https://www.ncbi.nlm.nih.gov/pubmed/35677348 http://dx.doi.org/10.1177/15593258221104609 |
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