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An ensemble model based on early predictors to forecast COVID-19 health care demand in France

Short-term forecasting of the COVID-19 pandemic is required to facilitate the planning of COVID-19 health care demand in hospitals. Here, we evaluate the performance of 12 individual models and 19 predictors to anticipate French COVID-19-related health care needs from September 7, 2020, to March 6,...

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Autores principales: Paireau, Juliette, Andronico, Alessio, Hozé, Nathanaël, Layan, Maylis, Crépey, Pascal, Roumagnac, Alix, Lavielle, Marc, Boëlle, Pierre-Yves, Cauchemez, Simon
Formato: Online Artículo Texto
Lenguaje:English
Publicado: National Academy of Sciences 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9170016/
https://www.ncbi.nlm.nih.gov/pubmed/35476520
http://dx.doi.org/10.1073/pnas.2103302119
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author Paireau, Juliette
Andronico, Alessio
Hozé, Nathanaël
Layan, Maylis
Crépey, Pascal
Roumagnac, Alix
Lavielle, Marc
Boëlle, Pierre-Yves
Cauchemez, Simon
author_facet Paireau, Juliette
Andronico, Alessio
Hozé, Nathanaël
Layan, Maylis
Crépey, Pascal
Roumagnac, Alix
Lavielle, Marc
Boëlle, Pierre-Yves
Cauchemez, Simon
author_sort Paireau, Juliette
collection PubMed
description Short-term forecasting of the COVID-19 pandemic is required to facilitate the planning of COVID-19 health care demand in hospitals. Here, we evaluate the performance of 12 individual models and 19 predictors to anticipate French COVID-19-related health care needs from September 7, 2020, to March 6, 2021. We then build an ensemble model by combining the individual forecasts and retrospectively test this model from March 7, 2021, to July 6, 2021. We find that the inclusion of early predictors (epidemiological, mobility, and meteorological predictors) can halve the rms error for 14-d–ahead forecasts, with epidemiological and mobility predictors contributing the most to the improvement. On average, the ensemble model is the best or second-best model, depending on the evaluation metric. Our approach facilitates the comparison and benchmarking of competing models through their integration in a coherent analytical framework, ensuring that avenues for future improvements can be identified.
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spelling pubmed-91700162022-06-07 An ensemble model based on early predictors to forecast COVID-19 health care demand in France Paireau, Juliette Andronico, Alessio Hozé, Nathanaël Layan, Maylis Crépey, Pascal Roumagnac, Alix Lavielle, Marc Boëlle, Pierre-Yves Cauchemez, Simon Proc Natl Acad Sci U S A Biological Sciences Short-term forecasting of the COVID-19 pandemic is required to facilitate the planning of COVID-19 health care demand in hospitals. Here, we evaluate the performance of 12 individual models and 19 predictors to anticipate French COVID-19-related health care needs from September 7, 2020, to March 6, 2021. We then build an ensemble model by combining the individual forecasts and retrospectively test this model from March 7, 2021, to July 6, 2021. We find that the inclusion of early predictors (epidemiological, mobility, and meteorological predictors) can halve the rms error for 14-d–ahead forecasts, with epidemiological and mobility predictors contributing the most to the improvement. On average, the ensemble model is the best or second-best model, depending on the evaluation metric. Our approach facilitates the comparison and benchmarking of competing models through their integration in a coherent analytical framework, ensuring that avenues for future improvements can be identified. National Academy of Sciences 2022-04-27 2022-05-03 /pmc/articles/PMC9170016/ /pubmed/35476520 http://dx.doi.org/10.1073/pnas.2103302119 Text en Copyright © 2022 the Author(s). Published by PNAS. https://creativecommons.org/licenses/by-nc-nd/4.0/This open access article is distributed under Creative Commons Attribution-NonCommercial-NoDerivatives License 4.0 (CC BY-NC-ND) (https://creativecommons.org/licenses/by-nc-nd/4.0/) .
spellingShingle Biological Sciences
Paireau, Juliette
Andronico, Alessio
Hozé, Nathanaël
Layan, Maylis
Crépey, Pascal
Roumagnac, Alix
Lavielle, Marc
Boëlle, Pierre-Yves
Cauchemez, Simon
An ensemble model based on early predictors to forecast COVID-19 health care demand in France
title An ensemble model based on early predictors to forecast COVID-19 health care demand in France
title_full An ensemble model based on early predictors to forecast COVID-19 health care demand in France
title_fullStr An ensemble model based on early predictors to forecast COVID-19 health care demand in France
title_full_unstemmed An ensemble model based on early predictors to forecast COVID-19 health care demand in France
title_short An ensemble model based on early predictors to forecast COVID-19 health care demand in France
title_sort ensemble model based on early predictors to forecast covid-19 health care demand in france
topic Biological Sciences
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9170016/
https://www.ncbi.nlm.nih.gov/pubmed/35476520
http://dx.doi.org/10.1073/pnas.2103302119
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