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BidSi6 and BidEL isoforms as a potential marker for predicting colorectal adenomatous polyps

BACKGROUND: As a well-known protein, Bid links the extrinsic and intrinsic apoptotic pathways and plays important roles in cell proliferation. In this study, we evaluated the expression of two isoforms of the Bid gene (BidSi6 and BidEL) in colorectal adenomatous polyps as a biomarker and investigate...

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Autores principales: Forouzesh, Flora, Kia, Fatemeh Sadat, Nazemalhosseini-Mojarad, Ehsan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9172139/
https://www.ncbi.nlm.nih.gov/pubmed/35668495
http://dx.doi.org/10.1186/s12920-022-01282-0
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author Forouzesh, Flora
Kia, Fatemeh Sadat
Nazemalhosseini-Mojarad, Ehsan
author_facet Forouzesh, Flora
Kia, Fatemeh Sadat
Nazemalhosseini-Mojarad, Ehsan
author_sort Forouzesh, Flora
collection PubMed
description BACKGROUND: As a well-known protein, Bid links the extrinsic and intrinsic apoptotic pathways and plays important roles in cell proliferation. In this study, we evaluated the expression of two isoforms of the Bid gene (BidSi6 and BidEL) in colorectal adenomatous polyps as a biomarker and investigated the relationship between their expression levels with clinicopathological factors. METHODS: The expression of BidSi6 and BidEL isoforms in 22 pairs of Adenomatous polyps and adjust non-polyp tissues was measured by qReal-Time PCR and compared with 10 normal colon tissues. ROC curve was performed to examine the diagnostic capacity. Also, sequencing was performed for molecular identification of BidSi6 isoform in adenomatous polyp. RESULTS: Our results showed that BidSi6 and BidEL isoforms were significantly overexpressed in Adenomatous polyps and non-polyp adjacent tissues from the same patients compared to that in normal colon tissues, but there was no significant expression between polyps and adjust non-polyp tissues. There were no significant correlations between the expression of two isoforms and other features of clinicopathology. The area under the curve of BidSi6 and BidEL isoforms indicated powerful diagnostic capability. The phylogenetic tree was constructed based on the sequence of idSi6 isoform, and the results showed that adenomatous polyp tissue and adjust non-polyp tissue were separated from healthy colorectal tissue and reference sequence (EU678292). CONCLUSIONS: These findings suggest that BidSi6 and BidEL isoforms can be used as new potential biomarkers in adenomatous polyps. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s12920-022-01282-0.
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spelling pubmed-91721392022-06-08 BidSi6 and BidEL isoforms as a potential marker for predicting colorectal adenomatous polyps Forouzesh, Flora Kia, Fatemeh Sadat Nazemalhosseini-Mojarad, Ehsan BMC Med Genomics Research BACKGROUND: As a well-known protein, Bid links the extrinsic and intrinsic apoptotic pathways and plays important roles in cell proliferation. In this study, we evaluated the expression of two isoforms of the Bid gene (BidSi6 and BidEL) in colorectal adenomatous polyps as a biomarker and investigated the relationship between their expression levels with clinicopathological factors. METHODS: The expression of BidSi6 and BidEL isoforms in 22 pairs of Adenomatous polyps and adjust non-polyp tissues was measured by qReal-Time PCR and compared with 10 normal colon tissues. ROC curve was performed to examine the diagnostic capacity. Also, sequencing was performed for molecular identification of BidSi6 isoform in adenomatous polyp. RESULTS: Our results showed that BidSi6 and BidEL isoforms were significantly overexpressed in Adenomatous polyps and non-polyp adjacent tissues from the same patients compared to that in normal colon tissues, but there was no significant expression between polyps and adjust non-polyp tissues. There were no significant correlations between the expression of two isoforms and other features of clinicopathology. The area under the curve of BidSi6 and BidEL isoforms indicated powerful diagnostic capability. The phylogenetic tree was constructed based on the sequence of idSi6 isoform, and the results showed that adenomatous polyp tissue and adjust non-polyp tissue were separated from healthy colorectal tissue and reference sequence (EU678292). CONCLUSIONS: These findings suggest that BidSi6 and BidEL isoforms can be used as new potential biomarkers in adenomatous polyps. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s12920-022-01282-0. BioMed Central 2022-06-06 /pmc/articles/PMC9172139/ /pubmed/35668495 http://dx.doi.org/10.1186/s12920-022-01282-0 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) ) applies to the data made available in this article, unless otherwise stated in a credit line to the data.
spellingShingle Research
Forouzesh, Flora
Kia, Fatemeh Sadat
Nazemalhosseini-Mojarad, Ehsan
BidSi6 and BidEL isoforms as a potential marker for predicting colorectal adenomatous polyps
title BidSi6 and BidEL isoforms as a potential marker for predicting colorectal adenomatous polyps
title_full BidSi6 and BidEL isoforms as a potential marker for predicting colorectal adenomatous polyps
title_fullStr BidSi6 and BidEL isoforms as a potential marker for predicting colorectal adenomatous polyps
title_full_unstemmed BidSi6 and BidEL isoforms as a potential marker for predicting colorectal adenomatous polyps
title_short BidSi6 and BidEL isoforms as a potential marker for predicting colorectal adenomatous polyps
title_sort bidsi6 and bidel isoforms as a potential marker for predicting colorectal adenomatous polyps
topic Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9172139/
https://www.ncbi.nlm.nih.gov/pubmed/35668495
http://dx.doi.org/10.1186/s12920-022-01282-0
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