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Balance of osmotic pressures determines the nuclear-to-cytoplasmic volume ratio of the cell

The volume of the cell nucleus varies across cell types and species and is commonly thought to be determined by the size of the genome and degree of chromatin compaction. However, this notion has been challenged over the years by much experimental evidence. Here, we consider the physical condition o...

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Autores principales: Deviri, Dan, Safran, Samuel A.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: National Academy of Sciences 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9173802/
https://www.ncbi.nlm.nih.gov/pubmed/35580183
http://dx.doi.org/10.1073/pnas.2118301119
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author Deviri, Dan
Safran, Samuel A.
author_facet Deviri, Dan
Safran, Samuel A.
author_sort Deviri, Dan
collection PubMed
description The volume of the cell nucleus varies across cell types and species and is commonly thought to be determined by the size of the genome and degree of chromatin compaction. However, this notion has been challenged over the years by much experimental evidence. Here, we consider the physical condition of mechanical force balance as a determining condition of the nuclear volume and use quantitative, order-of-magnitude analysis to estimate the forces from different sources of nuclear and cytoplasmic pressure. Our estimates suggest that the dominant pressure within the nucleus and cytoplasm of nonstriated muscle cells originates from the osmotic pressure of proteins and RNA molecules that are localized to the nucleus or cytoplasm by out-of-equilibrium, active nucleocytoplasmic transport rather than from chromatin or its associated ions. This motivates us to formulate a physical model for the ratio of the cell and nuclear volumes in which osmotic pressures of localized proteins determine the relative volumes. In accordance with unexplained observations that are a century old, our model predicts that the ratio of the cell and nuclear volumes is a constant, robust to a wide variety of biochemical and biophysical manipulations, and is changed only if gene expression or nucleocytoplasmic transport is modulated.
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spelling pubmed-91738022022-11-17 Balance of osmotic pressures determines the nuclear-to-cytoplasmic volume ratio of the cell Deviri, Dan Safran, Samuel A. Proc Natl Acad Sci U S A Physical Sciences The volume of the cell nucleus varies across cell types and species and is commonly thought to be determined by the size of the genome and degree of chromatin compaction. However, this notion has been challenged over the years by much experimental evidence. Here, we consider the physical condition of mechanical force balance as a determining condition of the nuclear volume and use quantitative, order-of-magnitude analysis to estimate the forces from different sources of nuclear and cytoplasmic pressure. Our estimates suggest that the dominant pressure within the nucleus and cytoplasm of nonstriated muscle cells originates from the osmotic pressure of proteins and RNA molecules that are localized to the nucleus or cytoplasm by out-of-equilibrium, active nucleocytoplasmic transport rather than from chromatin or its associated ions. This motivates us to formulate a physical model for the ratio of the cell and nuclear volumes in which osmotic pressures of localized proteins determine the relative volumes. In accordance with unexplained observations that are a century old, our model predicts that the ratio of the cell and nuclear volumes is a constant, robust to a wide variety of biochemical and biophysical manipulations, and is changed only if gene expression or nucleocytoplasmic transport is modulated. National Academy of Sciences 2022-05-17 2022-05-24 /pmc/articles/PMC9173802/ /pubmed/35580183 http://dx.doi.org/10.1073/pnas.2118301119 Text en Copyright © 2022 the Author(s). Published by PNAS. https://creativecommons.org/licenses/by-nc-nd/4.0/This article is distributed under Creative Commons Attribution-NonCommercial-NoDerivatives License 4.0 (CC BY-NC-ND) (https://creativecommons.org/licenses/by-nc-nd/4.0/) .
spellingShingle Physical Sciences
Deviri, Dan
Safran, Samuel A.
Balance of osmotic pressures determines the nuclear-to-cytoplasmic volume ratio of the cell
title Balance of osmotic pressures determines the nuclear-to-cytoplasmic volume ratio of the cell
title_full Balance of osmotic pressures determines the nuclear-to-cytoplasmic volume ratio of the cell
title_fullStr Balance of osmotic pressures determines the nuclear-to-cytoplasmic volume ratio of the cell
title_full_unstemmed Balance of osmotic pressures determines the nuclear-to-cytoplasmic volume ratio of the cell
title_short Balance of osmotic pressures determines the nuclear-to-cytoplasmic volume ratio of the cell
title_sort balance of osmotic pressures determines the nuclear-to-cytoplasmic volume ratio of the cell
topic Physical Sciences
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9173802/
https://www.ncbi.nlm.nih.gov/pubmed/35580183
http://dx.doi.org/10.1073/pnas.2118301119
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