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CRISPR-based systems for sensitive and rapid on-site COVID-19 diagnostics

The COVID-19 pandemic has strained healthcare systems. Sensitive, specific, and timely COVID-19 diagnosis is crucial for effective medical intervention and transmission control. RT-PCR is the most sensitive/specific, but requires costly equipment and trained personnel in centralized laboratories, wh...

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Autores principales: Soh, Jun Hui, Balleza, Enrique, Abdul Rahim, Muhammad Nadjad, Chan, Hsi-Min, Mohd Ali, Siswand, Chuah, Jacqueline Kai Chin, Edris, Sherif, Atef, Ahmed, Bahieldin, Ahmed, Ying, Jackie Y., Sabir, Jamal S.M.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier Ltd. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9174145/
https://www.ncbi.nlm.nih.gov/pubmed/35871983
http://dx.doi.org/10.1016/j.tibtech.2022.06.002
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author Soh, Jun Hui
Balleza, Enrique
Abdul Rahim, Muhammad Nadjad
Chan, Hsi-Min
Mohd Ali, Siswand
Chuah, Jacqueline Kai Chin
Edris, Sherif
Atef, Ahmed
Bahieldin, Ahmed
Ying, Jackie Y.
Sabir, Jamal S.M.
author_facet Soh, Jun Hui
Balleza, Enrique
Abdul Rahim, Muhammad Nadjad
Chan, Hsi-Min
Mohd Ali, Siswand
Chuah, Jacqueline Kai Chin
Edris, Sherif
Atef, Ahmed
Bahieldin, Ahmed
Ying, Jackie Y.
Sabir, Jamal S.M.
author_sort Soh, Jun Hui
collection PubMed
description The COVID-19 pandemic has strained healthcare systems. Sensitive, specific, and timely COVID-19 diagnosis is crucial for effective medical intervention and transmission control. RT-PCR is the most sensitive/specific, but requires costly equipment and trained personnel in centralized laboratories, which are inaccessible to resource-limited areas. Antigen rapid tests enable point-of-care (POC) detection but are significantly less sensitive/specific. CRISPR-Cas systems are compatible with isothermal amplification and dipstick readout, enabling sensitive/specific on-site testing. However, improvements in sensitivity and workflow complexity are needed to spur clinical adoption. We outline the mechanisms/strategies of major CRISPR-Cas systems, evaluate their on-site diagnostic capabilities, and discuss future research directions.
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spelling pubmed-91741452022-06-08 CRISPR-based systems for sensitive and rapid on-site COVID-19 diagnostics Soh, Jun Hui Balleza, Enrique Abdul Rahim, Muhammad Nadjad Chan, Hsi-Min Mohd Ali, Siswand Chuah, Jacqueline Kai Chin Edris, Sherif Atef, Ahmed Bahieldin, Ahmed Ying, Jackie Y. Sabir, Jamal S.M. Trends Biotechnol Review The COVID-19 pandemic has strained healthcare systems. Sensitive, specific, and timely COVID-19 diagnosis is crucial for effective medical intervention and transmission control. RT-PCR is the most sensitive/specific, but requires costly equipment and trained personnel in centralized laboratories, which are inaccessible to resource-limited areas. Antigen rapid tests enable point-of-care (POC) detection but are significantly less sensitive/specific. CRISPR-Cas systems are compatible with isothermal amplification and dipstick readout, enabling sensitive/specific on-site testing. However, improvements in sensitivity and workflow complexity are needed to spur clinical adoption. We outline the mechanisms/strategies of major CRISPR-Cas systems, evaluate their on-site diagnostic capabilities, and discuss future research directions. Elsevier Ltd. 2022-11 2022-06-08 /pmc/articles/PMC9174145/ /pubmed/35871983 http://dx.doi.org/10.1016/j.tibtech.2022.06.002 Text en © 2022 Elsevier Ltd. All rights reserved. Since January 2020 Elsevier has created a COVID-19 resource centre with free information in English and Mandarin on the novel coronavirus COVID-19. The COVID-19 resource centre is hosted on Elsevier Connect, the company's public news and information website. Elsevier hereby grants permission to make all its COVID-19-related research that is available on the COVID-19 resource centre - including this research content - immediately available in PubMed Central and other publicly funded repositories, such as the WHO COVID database with rights for unrestricted research re-use and analyses in any form or by any means with acknowledgement of the original source. These permissions are granted for free by Elsevier for as long as the COVID-19 resource centre remains active.
spellingShingle Review
Soh, Jun Hui
Balleza, Enrique
Abdul Rahim, Muhammad Nadjad
Chan, Hsi-Min
Mohd Ali, Siswand
Chuah, Jacqueline Kai Chin
Edris, Sherif
Atef, Ahmed
Bahieldin, Ahmed
Ying, Jackie Y.
Sabir, Jamal S.M.
CRISPR-based systems for sensitive and rapid on-site COVID-19 diagnostics
title CRISPR-based systems for sensitive and rapid on-site COVID-19 diagnostics
title_full CRISPR-based systems for sensitive and rapid on-site COVID-19 diagnostics
title_fullStr CRISPR-based systems for sensitive and rapid on-site COVID-19 diagnostics
title_full_unstemmed CRISPR-based systems for sensitive and rapid on-site COVID-19 diagnostics
title_short CRISPR-based systems for sensitive and rapid on-site COVID-19 diagnostics
title_sort crispr-based systems for sensitive and rapid on-site covid-19 diagnostics
topic Review
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9174145/
https://www.ncbi.nlm.nih.gov/pubmed/35871983
http://dx.doi.org/10.1016/j.tibtech.2022.06.002
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