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Impact of Human Genetic Variation on C-Reactive Protein Concentrations and Acute Appendicitis

BACKGROUND: Acute appendicitis is one of the most common abdominal emergencies worldwide. Both environmental and genetic factors contribute to the disease. C-reactive protein (CRP) is an important biomarker in the diagnosis of acute appendicitis. CRP concentrations are significantly affected by gene...

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Autores principales: Ricaño-Ponce, Isis, Peeters, Toon, Matzaraki, Vasiliki, Houben, Bert, Achten, Ruth, Cools, Peter, Netea, Mihai G., Gyssens, Inge C., Kumar, Vinod
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9174512/
https://www.ncbi.nlm.nih.gov/pubmed/35693796
http://dx.doi.org/10.3389/fimmu.2022.862742
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author Ricaño-Ponce, Isis
Peeters, Toon
Matzaraki, Vasiliki
Houben, Bert
Achten, Ruth
Cools, Peter
Netea, Mihai G.
Gyssens, Inge C.
Kumar, Vinod
author_facet Ricaño-Ponce, Isis
Peeters, Toon
Matzaraki, Vasiliki
Houben, Bert
Achten, Ruth
Cools, Peter
Netea, Mihai G.
Gyssens, Inge C.
Kumar, Vinod
author_sort Ricaño-Ponce, Isis
collection PubMed
description BACKGROUND: Acute appendicitis is one of the most common abdominal emergencies worldwide. Both environmental and genetic factors contribute to the disease. C-reactive protein (CRP) is an important biomarker in the diagnosis of acute appendicitis. CRP concentrations are significantly affected by genetic variation. However, whether such genetic variation is causally related to appendicitis risk remains unclear. In this study, the causal relationship between single-nucleotide polymorphisms (SNPs) associated with circulating CRP concentrations and the risk and severity of acute appendicitis was investigated. METHODS: CRP concentrations in serum of appendicitis patients (n = 325) were measured. Appendicitis was categorized as complicated/uncomplicated and gangrenous/non-gangrenous. Imputed SNP data (n = 287) were generated. A genome-wide association study (GWAS) on CRP concentrations and appendicitis severity was performed. Intersection and colocalization of the GWAS results were performed with appendicitis and CRP-associated loci from the Pan-UKBB cohort. A functional-genomics approach to prioritize genes was employed. RESULTS: Thirteen percent of significant CRP quantitative trait loci (QTLs) that were previously identified in a large cohort of healthy individuals were replicated in our small patient cohort. Significant enrichment of CRP-QTLs in association with appendicitis was observed. Among these shared loci, the two top loci at chromosomes 1q41 and 8p23.1 were characterized. The top SNP at chromosome 1q41 is located within the promoter of H2.0 Like Homeobox (HLX) gene, which is involved in blood cell differentiation, and liver and gut organogeneses. The expression of HLX is increased in the appendix of appendicitis patients compared to controls. The locus at 8p23.1 contains multiple genes, including cathepsin B (CTSB), which is overexpressed in appendix tissue from appendicitis patients. The risk allele of the top SNP in this locus also increases CTSB expression in the sigmoid colon of healthy individuals. CTSB is involved in collagen degradation, MHC class II antigen presentation, and neutrophil degranulation. CONCLUSIONS: The results of this study prioritize HLX and CTSB as potential causal genes for appendicitis and suggest a shared genetic mechanism between appendicitis and CRP concentrations.
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spelling pubmed-91745122022-06-09 Impact of Human Genetic Variation on C-Reactive Protein Concentrations and Acute Appendicitis Ricaño-Ponce, Isis Peeters, Toon Matzaraki, Vasiliki Houben, Bert Achten, Ruth Cools, Peter Netea, Mihai G. Gyssens, Inge C. Kumar, Vinod Front Immunol Immunology BACKGROUND: Acute appendicitis is one of the most common abdominal emergencies worldwide. Both environmental and genetic factors contribute to the disease. C-reactive protein (CRP) is an important biomarker in the diagnosis of acute appendicitis. CRP concentrations are significantly affected by genetic variation. However, whether such genetic variation is causally related to appendicitis risk remains unclear. In this study, the causal relationship between single-nucleotide polymorphisms (SNPs) associated with circulating CRP concentrations and the risk and severity of acute appendicitis was investigated. METHODS: CRP concentrations in serum of appendicitis patients (n = 325) were measured. Appendicitis was categorized as complicated/uncomplicated and gangrenous/non-gangrenous. Imputed SNP data (n = 287) were generated. A genome-wide association study (GWAS) on CRP concentrations and appendicitis severity was performed. Intersection and colocalization of the GWAS results were performed with appendicitis and CRP-associated loci from the Pan-UKBB cohort. A functional-genomics approach to prioritize genes was employed. RESULTS: Thirteen percent of significant CRP quantitative trait loci (QTLs) that were previously identified in a large cohort of healthy individuals were replicated in our small patient cohort. Significant enrichment of CRP-QTLs in association with appendicitis was observed. Among these shared loci, the two top loci at chromosomes 1q41 and 8p23.1 were characterized. The top SNP at chromosome 1q41 is located within the promoter of H2.0 Like Homeobox (HLX) gene, which is involved in blood cell differentiation, and liver and gut organogeneses. The expression of HLX is increased in the appendix of appendicitis patients compared to controls. The locus at 8p23.1 contains multiple genes, including cathepsin B (CTSB), which is overexpressed in appendix tissue from appendicitis patients. The risk allele of the top SNP in this locus also increases CTSB expression in the sigmoid colon of healthy individuals. CTSB is involved in collagen degradation, MHC class II antigen presentation, and neutrophil degranulation. CONCLUSIONS: The results of this study prioritize HLX and CTSB as potential causal genes for appendicitis and suggest a shared genetic mechanism between appendicitis and CRP concentrations. Frontiers Media S.A. 2022-05-25 /pmc/articles/PMC9174512/ /pubmed/35693796 http://dx.doi.org/10.3389/fimmu.2022.862742 Text en Copyright © 2022 Ricaño-Ponce, Peeters, Matzaraki, Houben, Achten, Cools, Netea, Gyssens and Kumar https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Immunology
Ricaño-Ponce, Isis
Peeters, Toon
Matzaraki, Vasiliki
Houben, Bert
Achten, Ruth
Cools, Peter
Netea, Mihai G.
Gyssens, Inge C.
Kumar, Vinod
Impact of Human Genetic Variation on C-Reactive Protein Concentrations and Acute Appendicitis
title Impact of Human Genetic Variation on C-Reactive Protein Concentrations and Acute Appendicitis
title_full Impact of Human Genetic Variation on C-Reactive Protein Concentrations and Acute Appendicitis
title_fullStr Impact of Human Genetic Variation on C-Reactive Protein Concentrations and Acute Appendicitis
title_full_unstemmed Impact of Human Genetic Variation on C-Reactive Protein Concentrations and Acute Appendicitis
title_short Impact of Human Genetic Variation on C-Reactive Protein Concentrations and Acute Appendicitis
title_sort impact of human genetic variation on c-reactive protein concentrations and acute appendicitis
topic Immunology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9174512/
https://www.ncbi.nlm.nih.gov/pubmed/35693796
http://dx.doi.org/10.3389/fimmu.2022.862742
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