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Emulator-based decomposition for structural sensitivity of core-level spectra
We explore the sensitivity of several core-level spectroscopic methods to the underlying atomistic structure by using the water molecule as our test system. We first define a metric that measures the magnitude of spectral change as a function of the structure, which allows for identifying structural...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
The Royal Society
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9174725/ https://www.ncbi.nlm.nih.gov/pubmed/35706659 http://dx.doi.org/10.1098/rsos.220093 |
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author | Niskanen, J. Vladyka, A. Niemi, J. Sahle, C.J. |
author_facet | Niskanen, J. Vladyka, A. Niemi, J. Sahle, C.J. |
author_sort | Niskanen, J. |
collection | PubMed |
description | We explore the sensitivity of several core-level spectroscopic methods to the underlying atomistic structure by using the water molecule as our test system. We first define a metric that measures the magnitude of spectral change as a function of the structure, which allows for identifying structural regions with high spectral sensitivity. We then apply machine-learning-emulator-based decomposition of the structural parameter space for maximal explained spectral variance, first on overall spectral profile and then on chosen integrated regions of interest therein. The presented method recovers more spectral variance than partial least-squares fitting and the observed behaviour is well in line with the aforementioned metric for spectral sensitivity. The analysis method is able to independently identify spectroscopically dominant degrees of freedom, and to quantify their effect and significance. |
format | Online Article Text |
id | pubmed-9174725 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | The Royal Society |
record_format | MEDLINE/PubMed |
spelling | pubmed-91747252022-06-14 Emulator-based decomposition for structural sensitivity of core-level spectra Niskanen, J. Vladyka, A. Niemi, J. Sahle, C.J. R Soc Open Sci Chemistry We explore the sensitivity of several core-level spectroscopic methods to the underlying atomistic structure by using the water molecule as our test system. We first define a metric that measures the magnitude of spectral change as a function of the structure, which allows for identifying structural regions with high spectral sensitivity. We then apply machine-learning-emulator-based decomposition of the structural parameter space for maximal explained spectral variance, first on overall spectral profile and then on chosen integrated regions of interest therein. The presented method recovers more spectral variance than partial least-squares fitting and the observed behaviour is well in line with the aforementioned metric for spectral sensitivity. The analysis method is able to independently identify spectroscopically dominant degrees of freedom, and to quantify their effect and significance. The Royal Society 2022-06-08 /pmc/articles/PMC9174725/ /pubmed/35706659 http://dx.doi.org/10.1098/rsos.220093 Text en © 2022 The Authors. https://creativecommons.org/licenses/by/4.0/Published by the Royal Society under the terms of the Creative Commons Attribution License http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, provided the original author and source are credited. |
spellingShingle | Chemistry Niskanen, J. Vladyka, A. Niemi, J. Sahle, C.J. Emulator-based decomposition for structural sensitivity of core-level spectra |
title | Emulator-based decomposition for structural sensitivity of core-level spectra |
title_full | Emulator-based decomposition for structural sensitivity of core-level spectra |
title_fullStr | Emulator-based decomposition for structural sensitivity of core-level spectra |
title_full_unstemmed | Emulator-based decomposition for structural sensitivity of core-level spectra |
title_short | Emulator-based decomposition for structural sensitivity of core-level spectra |
title_sort | emulator-based decomposition for structural sensitivity of core-level spectra |
topic | Chemistry |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9174725/ https://www.ncbi.nlm.nih.gov/pubmed/35706659 http://dx.doi.org/10.1098/rsos.220093 |
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