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Artificial intelligence processing electronic health records to identify commonalities and comorbidities cluster at Immuno Center Humanitas
BACKGROUND: Comorbidities are common in chronic inflammatory conditions, requiring multidisciplinary treatment approach. Understanding the link between a single disease and its comorbidities is important for appropriate treatment and management. We evaluate the ability of an NLP‐based process for kn...
Autores principales: | , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
John Wiley and Sons Inc.
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9175261/ https://www.ncbi.nlm.nih.gov/pubmed/35702725 http://dx.doi.org/10.1002/clt2.12144 |
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author | Morandini, Pierandrea Laino, Maria Elena Paoletti, Giovanni Carlucci, Alessandro Tommasini, Tobia Angelotti, Giovanni Pepys, Jack Canonica, Giorgio Walter Heffler, Enrico Savevski, Victor Puggioni, Francesca |
author_facet | Morandini, Pierandrea Laino, Maria Elena Paoletti, Giovanni Carlucci, Alessandro Tommasini, Tobia Angelotti, Giovanni Pepys, Jack Canonica, Giorgio Walter Heffler, Enrico Savevski, Victor Puggioni, Francesca |
author_sort | Morandini, Pierandrea |
collection | PubMed |
description | BACKGROUND: Comorbidities are common in chronic inflammatory conditions, requiring multidisciplinary treatment approach. Understanding the link between a single disease and its comorbidities is important for appropriate treatment and management. We evaluate the ability of an NLP‐based process for knowledge discovery to detect information about pathologies, patients' phenotype, doctors' prescriptions and commonalities in electronic medical records, by extracting information from free narrative text written by clinicians during medical visits, resulting in the extraction of valuable information and enriching real world evidence data from a multidisciplinary setting. METHODS: We collected clinical notes from the Allergy Department of Humanitas Research Hospital written in the last 3 years and used it to look for diseases that cluster together as comorbidities associated to the main pathology of our patients, and for the extent of prescription of systemic corticosteroids, thus evaluating the ability of NLP‐based tools for knowledge discovery to extract structured information from free text. RESULTS: We found that the 3 most frequent comorbidities to appear in our clusters were asthma, rhinitis, and urticaria, and that 991 (of 2057) patients suffered from at least one of these comorbidities. The clusters which co‐occur particularly often are oral allergy syndrome and urticaria (131 patients), angioedema and urticaria (105 patients), rhinitis and asthma (227 patients). With regards to systemic corticosteroid prescription volume by our clinicians, we found it was lower when compared to the therapy the patients followed before coming to our attention, with the exception of two diseases: Chronic obstructive pulmonary disease and Angioedema. CONCLUSIONS: This analysis seems to be valid and is confirmed by the data from the literature. This means that NLP tools could have significant role in many other research fields of medicine, as it may help identify other important, and possibly previously neglected clusters of patients with comorbidities and commonalities. Another potential benefit of this approach lies in its potential ability to foster a multidisciplinary approach, using the same drugs to treat pathologies normally treated by physicians in different branches of medicine, thus saving resources and improving the pharmacological management of patients. |
format | Online Article Text |
id | pubmed-9175261 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | John Wiley and Sons Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-91752612022-06-13 Artificial intelligence processing electronic health records to identify commonalities and comorbidities cluster at Immuno Center Humanitas Morandini, Pierandrea Laino, Maria Elena Paoletti, Giovanni Carlucci, Alessandro Tommasini, Tobia Angelotti, Giovanni Pepys, Jack Canonica, Giorgio Walter Heffler, Enrico Savevski, Victor Puggioni, Francesca Clin Transl Allergy Original Article BACKGROUND: Comorbidities are common in chronic inflammatory conditions, requiring multidisciplinary treatment approach. Understanding the link between a single disease and its comorbidities is important for appropriate treatment and management. We evaluate the ability of an NLP‐based process for knowledge discovery to detect information about pathologies, patients' phenotype, doctors' prescriptions and commonalities in electronic medical records, by extracting information from free narrative text written by clinicians during medical visits, resulting in the extraction of valuable information and enriching real world evidence data from a multidisciplinary setting. METHODS: We collected clinical notes from the Allergy Department of Humanitas Research Hospital written in the last 3 years and used it to look for diseases that cluster together as comorbidities associated to the main pathology of our patients, and for the extent of prescription of systemic corticosteroids, thus evaluating the ability of NLP‐based tools for knowledge discovery to extract structured information from free text. RESULTS: We found that the 3 most frequent comorbidities to appear in our clusters were asthma, rhinitis, and urticaria, and that 991 (of 2057) patients suffered from at least one of these comorbidities. The clusters which co‐occur particularly often are oral allergy syndrome and urticaria (131 patients), angioedema and urticaria (105 patients), rhinitis and asthma (227 patients). With regards to systemic corticosteroid prescription volume by our clinicians, we found it was lower when compared to the therapy the patients followed before coming to our attention, with the exception of two diseases: Chronic obstructive pulmonary disease and Angioedema. CONCLUSIONS: This analysis seems to be valid and is confirmed by the data from the literature. This means that NLP tools could have significant role in many other research fields of medicine, as it may help identify other important, and possibly previously neglected clusters of patients with comorbidities and commonalities. Another potential benefit of this approach lies in its potential ability to foster a multidisciplinary approach, using the same drugs to treat pathologies normally treated by physicians in different branches of medicine, thus saving resources and improving the pharmacological management of patients. John Wiley and Sons Inc. 2022-06-08 /pmc/articles/PMC9175261/ /pubmed/35702725 http://dx.doi.org/10.1002/clt2.12144 Text en © 2022 The Authors. Clinical and Translational Allergy published by John Wiley and Sons Ltd on behalf of European Academy of Allergy and Clinical Immunology. https://creativecommons.org/licenses/by/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Original Article Morandini, Pierandrea Laino, Maria Elena Paoletti, Giovanni Carlucci, Alessandro Tommasini, Tobia Angelotti, Giovanni Pepys, Jack Canonica, Giorgio Walter Heffler, Enrico Savevski, Victor Puggioni, Francesca Artificial intelligence processing electronic health records to identify commonalities and comorbidities cluster at Immuno Center Humanitas |
title | Artificial intelligence processing electronic health records to identify commonalities and comorbidities cluster at Immuno Center Humanitas |
title_full | Artificial intelligence processing electronic health records to identify commonalities and comorbidities cluster at Immuno Center Humanitas |
title_fullStr | Artificial intelligence processing electronic health records to identify commonalities and comorbidities cluster at Immuno Center Humanitas |
title_full_unstemmed | Artificial intelligence processing electronic health records to identify commonalities and comorbidities cluster at Immuno Center Humanitas |
title_short | Artificial intelligence processing electronic health records to identify commonalities and comorbidities cluster at Immuno Center Humanitas |
title_sort | artificial intelligence processing electronic health records to identify commonalities and comorbidities cluster at immuno center humanitas |
topic | Original Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9175261/ https://www.ncbi.nlm.nih.gov/pubmed/35702725 http://dx.doi.org/10.1002/clt2.12144 |
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