The complete chloroplast genome of weedy rye Secale cereale subsp. segetale

Weedy rye (Secale cereale subsp. segetale Zhukov 1928) is a problematic weed species in wheat field. However, it can potentially provide valuable genetics resources to increase the genetic variations and introduce desirable genes for rye and wheat breeding. Here, we assembled the complete chloroplas...

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Autores principales: Du, Tianyu, Hu, Yiyu, Sun, Yanqing, Ye, Chuyu, Shen, Enhui
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2022
Materias:
Plastome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9176342/
https://www.ncbi.nlm.nih.gov/pubmed/35692639
http://dx.doi.org/10.1080/23802359.2022.2080600
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author Du, Tianyu
Hu, Yiyu
Sun, Yanqing
Ye, Chuyu
Shen, Enhui
author_facet Du, Tianyu
Hu, Yiyu
Sun, Yanqing
Ye, Chuyu
Shen, Enhui
author_sort Du, Tianyu
collection PubMed
description Weedy rye (Secale cereale subsp. segetale Zhukov 1928) is a problematic weed species in wheat field. However, it can potentially provide valuable genetics resources to increase the genetic variations and introduce desirable genes for rye and wheat breeding. Here, we assembled the complete chloroplast genome of S. cereale subsp. segetale. The chloroplast genome is 137,051 bp in length, containing a large single copy region (81,090 bp), a small single copy region (12,795 bp) and two separated inverted repeat regions (21,583 bp). A total of 131 unique genes were annotated, consisting of 82 protein-coding genes, 41 tRNA genes, and 8 rRNA genes. The phylogenetic analysis showed that Secale cereale subsp. segetale (weedy rye) and S. cereale subsp. cereale (rye) clustered together as sisters to other Secale species.
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spelling pubmed-91763422022-06-09 The complete chloroplast genome of weedy rye Secale cereale subsp. segetale Du, Tianyu Hu, Yiyu Sun, Yanqing Ye, Chuyu Shen, Enhui Mitochondrial DNA B Resour Plastome Announcement Weedy rye (Secale cereale subsp. segetale Zhukov 1928) is a problematic weed species in wheat field. However, it can potentially provide valuable genetics resources to increase the genetic variations and introduce desirable genes for rye and wheat breeding. Here, we assembled the complete chloroplast genome of S. cereale subsp. segetale. The chloroplast genome is 137,051 bp in length, containing a large single copy region (81,090 bp), a small single copy region (12,795 bp) and two separated inverted repeat regions (21,583 bp). A total of 131 unique genes were annotated, consisting of 82 protein-coding genes, 41 tRNA genes, and 8 rRNA genes. The phylogenetic analysis showed that Secale cereale subsp. segetale (weedy rye) and S. cereale subsp. cereale (rye) clustered together as sisters to other Secale species. Taylor & Francis 2022-06-02 /pmc/articles/PMC9176342/ /pubmed/35692639 http://dx.doi.org/10.1080/23802359.2022.2080600 Text en © 2022 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Plastome Announcement
Du, Tianyu
Hu, Yiyu
Sun, Yanqing
Ye, Chuyu
Shen, Enhui
The complete chloroplast genome of weedy rye Secale cereale subsp. segetale
title The complete chloroplast genome of weedy rye Secale cereale subsp. segetale
title_full The complete chloroplast genome of weedy rye Secale cereale subsp. segetale
title_fullStr The complete chloroplast genome of weedy rye Secale cereale subsp. segetale
title_full_unstemmed The complete chloroplast genome of weedy rye Secale cereale subsp. segetale
title_short The complete chloroplast genome of weedy rye Secale cereale subsp. segetale
title_sort complete chloroplast genome of weedy rye secale cereale subsp. segetale
topic Plastome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9176342/
https://www.ncbi.nlm.nih.gov/pubmed/35692639
http://dx.doi.org/10.1080/23802359.2022.2080600
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