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Concordance of SARS-CoV-2 RNA in Aerosols From a Nurses Station and in Nurses and Patients During a Hospital Ward Outbreak

IMPORTANCE: Aerosol-borne SARS-CoV-2 has not been linked specifically to nosocomial outbreaks. OBJECTIVE: To explore the genomic concordance of SARS-CoV-2 from aerosol particles of various sizes and infected nurses and patients during a nosocomial outbreak of COVID-19. DESIGN, SETTING, AND PARTICIPA...

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Autores principales: Stern, Rebecca A., Charness, Michael E., Gupta, Kalpana, Koutrakis, Petros, Linsenmeyer, Katherine, Madjarov, Rebecca, Martins, Marco A. G., Lemos, Bernardo, Dowd, Scot E., Garshick, Eric
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Medical Association 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9178433/
https://www.ncbi.nlm.nih.gov/pubmed/35675074
http://dx.doi.org/10.1001/jamanetworkopen.2022.16176
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author Stern, Rebecca A.
Charness, Michael E.
Gupta, Kalpana
Koutrakis, Petros
Linsenmeyer, Katherine
Madjarov, Rebecca
Martins, Marco A. G.
Lemos, Bernardo
Dowd, Scot E.
Garshick, Eric
author_facet Stern, Rebecca A.
Charness, Michael E.
Gupta, Kalpana
Koutrakis, Petros
Linsenmeyer, Katherine
Madjarov, Rebecca
Martins, Marco A. G.
Lemos, Bernardo
Dowd, Scot E.
Garshick, Eric
author_sort Stern, Rebecca A.
collection PubMed
description IMPORTANCE: Aerosol-borne SARS-CoV-2 has not been linked specifically to nosocomial outbreaks. OBJECTIVE: To explore the genomic concordance of SARS-CoV-2 from aerosol particles of various sizes and infected nurses and patients during a nosocomial outbreak of COVID-19. DESIGN, SETTING, AND PARTICIPANTS: This cohort study included patients and nursing staff in a US Department of Veterans Affairs inpatient hospital unit and long-term-care facility during a COVID-19 outbreak between December 27, 2020, and January 8, 2021. Outbreak contact tracing was conducted using exposure histories and screening with reverse transcriptase–polymerase chain reaction (RT-PCR) for SARS-CoV-2. Size-selective particle samplers were deployed in diverse clinical areas of a multicampus health care system from November 2020 to March 2021. Viral genomic sequences from infected nurses and patients were sequenced and compared with ward nurses station aerosol samples. EXPOSURE: SARS-CoV-2. MAIN OUTCOMES AND MEASURES: The primary outcome was positive RT-PCR results and genomic similarity between SARS-CoV-2 RNA in aerosols and human samples. Air samplers were used to detect SARS-CoV-2 RNA in aerosols on hospital units where health care personnel were or were not under routine surveillance for SARS-CoV-2 infection. RESULTS: A total of 510 size-fractionated air particle samples were collected. Samples representing 3 size fractions (>10 μm, 2.5-10 μm, and <2.5 μm) obtained at the nurses station were positive for SARS-CoV-2 during the outbreak (3 of 30 samples [10%]) and negative during 9 other collection periods. SARS-CoV-2 partial genome sequences for the smallest particle fraction were 100% identical with all 3 human samples; the remaining size fractions shared >99.9% sequence identity with the human samples. Fragments of SARS-CoV-2 RNA were detected by RT-PCR in 24 of 300 samples (8.0%) in units where health care personnel were not under surveillance and 7 of 210 samples (3.3%; P = .03) where they were under surveillance. CONCLUSIONS AND RELEVANCE: In this cohort study, the finding of genetically identical SARS-CoV-2 RNA fragments in aerosols obtained from a nurses station and in human samples during a nosocomial outbreak suggests that aerosols may have contributed to hospital transmission. Surveillance, along with ventilation, masking, and distancing, may reduce the introduction of community-acquired SARS-CoV-2 into aerosols on hospital wards, thereby reducing the risk of hospital transmission.
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spelling pubmed-91784332022-06-16 Concordance of SARS-CoV-2 RNA in Aerosols From a Nurses Station and in Nurses and Patients During a Hospital Ward Outbreak Stern, Rebecca A. Charness, Michael E. Gupta, Kalpana Koutrakis, Petros Linsenmeyer, Katherine Madjarov, Rebecca Martins, Marco A. G. Lemos, Bernardo Dowd, Scot E. Garshick, Eric JAMA Netw Open Original Investigation IMPORTANCE: Aerosol-borne SARS-CoV-2 has not been linked specifically to nosocomial outbreaks. OBJECTIVE: To explore the genomic concordance of SARS-CoV-2 from aerosol particles of various sizes and infected nurses and patients during a nosocomial outbreak of COVID-19. DESIGN, SETTING, AND PARTICIPANTS: This cohort study included patients and nursing staff in a US Department of Veterans Affairs inpatient hospital unit and long-term-care facility during a COVID-19 outbreak between December 27, 2020, and January 8, 2021. Outbreak contact tracing was conducted using exposure histories and screening with reverse transcriptase–polymerase chain reaction (RT-PCR) for SARS-CoV-2. Size-selective particle samplers were deployed in diverse clinical areas of a multicampus health care system from November 2020 to March 2021. Viral genomic sequences from infected nurses and patients were sequenced and compared with ward nurses station aerosol samples. EXPOSURE: SARS-CoV-2. MAIN OUTCOMES AND MEASURES: The primary outcome was positive RT-PCR results and genomic similarity between SARS-CoV-2 RNA in aerosols and human samples. Air samplers were used to detect SARS-CoV-2 RNA in aerosols on hospital units where health care personnel were or were not under routine surveillance for SARS-CoV-2 infection. RESULTS: A total of 510 size-fractionated air particle samples were collected. Samples representing 3 size fractions (>10 μm, 2.5-10 μm, and <2.5 μm) obtained at the nurses station were positive for SARS-CoV-2 during the outbreak (3 of 30 samples [10%]) and negative during 9 other collection periods. SARS-CoV-2 partial genome sequences for the smallest particle fraction were 100% identical with all 3 human samples; the remaining size fractions shared >99.9% sequence identity with the human samples. Fragments of SARS-CoV-2 RNA were detected by RT-PCR in 24 of 300 samples (8.0%) in units where health care personnel were not under surveillance and 7 of 210 samples (3.3%; P = .03) where they were under surveillance. CONCLUSIONS AND RELEVANCE: In this cohort study, the finding of genetically identical SARS-CoV-2 RNA fragments in aerosols obtained from a nurses station and in human samples during a nosocomial outbreak suggests that aerosols may have contributed to hospital transmission. Surveillance, along with ventilation, masking, and distancing, may reduce the introduction of community-acquired SARS-CoV-2 into aerosols on hospital wards, thereby reducing the risk of hospital transmission. American Medical Association 2022-06-08 /pmc/articles/PMC9178433/ /pubmed/35675074 http://dx.doi.org/10.1001/jamanetworkopen.2022.16176 Text en Copyright 2022 Stern RA et al. JAMA Network Open. https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the terms of the CC-BY License.
spellingShingle Original Investigation
Stern, Rebecca A.
Charness, Michael E.
Gupta, Kalpana
Koutrakis, Petros
Linsenmeyer, Katherine
Madjarov, Rebecca
Martins, Marco A. G.
Lemos, Bernardo
Dowd, Scot E.
Garshick, Eric
Concordance of SARS-CoV-2 RNA in Aerosols From a Nurses Station and in Nurses and Patients During a Hospital Ward Outbreak
title Concordance of SARS-CoV-2 RNA in Aerosols From a Nurses Station and in Nurses and Patients During a Hospital Ward Outbreak
title_full Concordance of SARS-CoV-2 RNA in Aerosols From a Nurses Station and in Nurses and Patients During a Hospital Ward Outbreak
title_fullStr Concordance of SARS-CoV-2 RNA in Aerosols From a Nurses Station and in Nurses and Patients During a Hospital Ward Outbreak
title_full_unstemmed Concordance of SARS-CoV-2 RNA in Aerosols From a Nurses Station and in Nurses and Patients During a Hospital Ward Outbreak
title_short Concordance of SARS-CoV-2 RNA in Aerosols From a Nurses Station and in Nurses and Patients During a Hospital Ward Outbreak
title_sort concordance of sars-cov-2 rna in aerosols from a nurses station and in nurses and patients during a hospital ward outbreak
topic Original Investigation
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9178433/
https://www.ncbi.nlm.nih.gov/pubmed/35675074
http://dx.doi.org/10.1001/jamanetworkopen.2022.16176
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