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Adamant: a JSON schema-based metadata editor for research data management workflows

The web tool Adamant has been developed to systematically collect research metadata as early as the conception of the experiment. Adamant enables a continuous, consistent, and transparent research data management (RDM) process, which is a key element of good scientific practice ensuring the path to...

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Detalles Bibliográficos
Autores principales: Chaerony Siffa, Ihda, Schäfer, Jan, Becker, Markus M.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: F1000 Research Limited 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9178528/
https://www.ncbi.nlm.nih.gov/pubmed/35707001
http://dx.doi.org/10.12688/f1000research.110875.2
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author Chaerony Siffa, Ihda
Schäfer, Jan
Becker, Markus M.
author_facet Chaerony Siffa, Ihda
Schäfer, Jan
Becker, Markus M.
author_sort Chaerony Siffa, Ihda
collection PubMed
description The web tool Adamant has been developed to systematically collect research metadata as early as the conception of the experiment. Adamant enables a continuous, consistent, and transparent research data management (RDM) process, which is a key element of good scientific practice ensuring the path to Findable, Accessible, Interoperable, Reusable (FAIR) research data. It simplifies the creation of on-demand metadata schemas and the collection of metadata according to established or new standards. The approach is based on JavaScript Object Notation (JSON) schema, where any valid schema can be presented as an interactive web-form. Furthermore, Adamant eases the integration of numerous available RDM methods and software tools into the everyday research activities of especially small independent laboratories. A programming interface allows programmatic integration with other software tools such as electronic lab books or repositories. The user interface (UI) of Adamant is designed to be as user friendly as possible. Each UI element is self-explanatory and intuitive to use, which makes it accessible for users that have little to no experience with JSON format and programming in general. Several examples of research data management workflows that can be implemented using Adamant are introduced. Adamant (client-only version) is available from: https://plasma-mds.github.io/adamant.
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spelling pubmed-91785282022-06-14 Adamant: a JSON schema-based metadata editor for research data management workflows Chaerony Siffa, Ihda Schäfer, Jan Becker, Markus M. F1000Res Software Tool Article The web tool Adamant has been developed to systematically collect research metadata as early as the conception of the experiment. Adamant enables a continuous, consistent, and transparent research data management (RDM) process, which is a key element of good scientific practice ensuring the path to Findable, Accessible, Interoperable, Reusable (FAIR) research data. It simplifies the creation of on-demand metadata schemas and the collection of metadata according to established or new standards. The approach is based on JavaScript Object Notation (JSON) schema, where any valid schema can be presented as an interactive web-form. Furthermore, Adamant eases the integration of numerous available RDM methods and software tools into the everyday research activities of especially small independent laboratories. A programming interface allows programmatic integration with other software tools such as electronic lab books or repositories. The user interface (UI) of Adamant is designed to be as user friendly as possible. Each UI element is self-explanatory and intuitive to use, which makes it accessible for users that have little to no experience with JSON format and programming in general. Several examples of research data management workflows that can be implemented using Adamant are introduced. Adamant (client-only version) is available from: https://plasma-mds.github.io/adamant. F1000 Research Limited 2022-07-19 /pmc/articles/PMC9178528/ /pubmed/35707001 http://dx.doi.org/10.12688/f1000research.110875.2 Text en Copyright: © 2022 Chaerony Siffa I et al. https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Software Tool Article
Chaerony Siffa, Ihda
Schäfer, Jan
Becker, Markus M.
Adamant: a JSON schema-based metadata editor for research data management workflows
title Adamant: a JSON schema-based metadata editor for research data management workflows
title_full Adamant: a JSON schema-based metadata editor for research data management workflows
title_fullStr Adamant: a JSON schema-based metadata editor for research data management workflows
title_full_unstemmed Adamant: a JSON schema-based metadata editor for research data management workflows
title_short Adamant: a JSON schema-based metadata editor for research data management workflows
title_sort adamant: a json schema-based metadata editor for research data management workflows
topic Software Tool Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9178528/
https://www.ncbi.nlm.nih.gov/pubmed/35707001
http://dx.doi.org/10.12688/f1000research.110875.2
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