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Methods for Improving the Variance Estimator of the Kaplan–Meier Survival Function, When There Is No, Moderate and Heavy Censoring-Applied in Oncological Datasets
In case of heavy and even moderate censoring, a common problem with the Greenwood and Peto variance estimators of the Kaplan–Meier survival function is that they can underestimate the true variance in the left and right tails of the survival distribution. Here, we introduce a variance estimator for...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9178555/ https://www.ncbi.nlm.nih.gov/pubmed/35692348 http://dx.doi.org/10.3389/fpubh.2022.793648 |
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author | Khan, Habib Nawaz Zaman, Qamruz Azmi, Fatima Shahzada, Gulap Jakovljevic, Mihajlo |
author_facet | Khan, Habib Nawaz Zaman, Qamruz Azmi, Fatima Shahzada, Gulap Jakovljevic, Mihajlo |
author_sort | Khan, Habib Nawaz |
collection | PubMed |
description | In case of heavy and even moderate censoring, a common problem with the Greenwood and Peto variance estimators of the Kaplan–Meier survival function is that they can underestimate the true variance in the left and right tails of the survival distribution. Here, we introduce a variance estimator for the Kaplan–Meier survival function by assigning weight greater than zero to the censored observation. On the basis of this weight, a modification of the Kaplan–Meier survival function and its variance is proposed. An advantage of this approach is that it gives non-parametric estimates at each point whether the event occurred or not. The performance of the variance of this new method is compared with the Greenwood, Peto, regular, and adjusted hybrid variance estimators. Several combinations of these methods with the new method are examined and compared on three datasets, such as leukemia clinical trial data, thalassaemia data as well as cancer data. Thalassaemia is an inherited blood disease, very common in Pakistan, where our data are derived from. |
format | Online Article Text |
id | pubmed-9178555 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-91785552022-06-10 Methods for Improving the Variance Estimator of the Kaplan–Meier Survival Function, When There Is No, Moderate and Heavy Censoring-Applied in Oncological Datasets Khan, Habib Nawaz Zaman, Qamruz Azmi, Fatima Shahzada, Gulap Jakovljevic, Mihajlo Front Public Health Public Health In case of heavy and even moderate censoring, a common problem with the Greenwood and Peto variance estimators of the Kaplan–Meier survival function is that they can underestimate the true variance in the left and right tails of the survival distribution. Here, we introduce a variance estimator for the Kaplan–Meier survival function by assigning weight greater than zero to the censored observation. On the basis of this weight, a modification of the Kaplan–Meier survival function and its variance is proposed. An advantage of this approach is that it gives non-parametric estimates at each point whether the event occurred or not. The performance of the variance of this new method is compared with the Greenwood, Peto, regular, and adjusted hybrid variance estimators. Several combinations of these methods with the new method are examined and compared on three datasets, such as leukemia clinical trial data, thalassaemia data as well as cancer data. Thalassaemia is an inherited blood disease, very common in Pakistan, where our data are derived from. Frontiers Media S.A. 2022-05-26 /pmc/articles/PMC9178555/ /pubmed/35692348 http://dx.doi.org/10.3389/fpubh.2022.793648 Text en Copyright © 2022 Khan, Zaman, Azmi, Shahzada and Jakovljevic. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Public Health Khan, Habib Nawaz Zaman, Qamruz Azmi, Fatima Shahzada, Gulap Jakovljevic, Mihajlo Methods for Improving the Variance Estimator of the Kaplan–Meier Survival Function, When There Is No, Moderate and Heavy Censoring-Applied in Oncological Datasets |
title | Methods for Improving the Variance Estimator of the Kaplan–Meier Survival Function, When There Is No, Moderate and Heavy Censoring-Applied in Oncological Datasets |
title_full | Methods for Improving the Variance Estimator of the Kaplan–Meier Survival Function, When There Is No, Moderate and Heavy Censoring-Applied in Oncological Datasets |
title_fullStr | Methods for Improving the Variance Estimator of the Kaplan–Meier Survival Function, When There Is No, Moderate and Heavy Censoring-Applied in Oncological Datasets |
title_full_unstemmed | Methods for Improving the Variance Estimator of the Kaplan–Meier Survival Function, When There Is No, Moderate and Heavy Censoring-Applied in Oncological Datasets |
title_short | Methods for Improving the Variance Estimator of the Kaplan–Meier Survival Function, When There Is No, Moderate and Heavy Censoring-Applied in Oncological Datasets |
title_sort | methods for improving the variance estimator of the kaplan–meier survival function, when there is no, moderate and heavy censoring-applied in oncological datasets |
topic | Public Health |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9178555/ https://www.ncbi.nlm.nih.gov/pubmed/35692348 http://dx.doi.org/10.3389/fpubh.2022.793648 |
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