Cargando…

Copy Number Variations Contribute to Intramuscular Fat Content Differences by Affecting the Expression of PELP1 Alternative Splices in Pigs

SIMPLE SUMMARY: Copy number variation (CNV) is a type of variant that may influence meat quality of, for example intramuscular fat (IMF). In this study, a genome-wide association study (GWAS) was then performed between CNVs and IMF in a pig F2 resource population. A total of 19 CNVRs were found to b...

Descripción completa

Detalles Bibliográficos
Autores principales:	Wei, Xia, Shu, Ze, Wang, Ligang, Zhang, Tian, Zhang, Longchao, Hou, Xinhua, Yan, Hua, Wang, Lixian
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	MDPI 2022
Materias:	Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9179479/ https://www.ncbi.nlm.nih.gov/pubmed/35681846 http://dx.doi.org/10.3390/ani12111382

Ejemplares similares

Integrative Analysis of Nanopore and Illumina Sequencing Reveals Alternative Splicing Complexity in Pig Longissimus Dorsi Muscle
por: Shu, Ze, et al.
Publicado: (2022)

Genome-Wide Identification of RNA Editing Sites Affecting Intramuscular Fat in Pigs
por: Wang, Ligang, et al.
Publicado: (2020)

NTN1 Affects Porcine Intramuscular Fat Content by Affecting the Expression of Myogenic Regulatory Factors
por: Wang, Ligang, et al.
Publicado: (2019)

IRLnc: a novel functional noncoding RNA contributes to intramuscular fat deposition
por: Wang, Ligang, et al.
Publicado: (2021)

Characterization of Alternative Splicing Events in Porcine Skeletal Muscles with Different Intramuscular Fat Contents
por: Hao, Wanjun, et al.
Publicado: (2022)

Optimizing the Construction and Update Strategies for the Genomic Selection of Pig Reference and Candidate Populations in China
por: Wei, Xia, et al.
Publicado: (2022)

Expression and Genetic Effects of GLI Pathogenesis-Related 1 Gene on Backfat Thickness in Pigs
por: Liu, Xin, et al.
Publicado: (2022)

Metabolite and Proteomic Profiling of Serum Reveals the Differences in Molecular Immunity between Min and Large White Pig Breeds
por: Yang, Liyu, et al.
Publicado: (2023)

Integrated Proteotranscriptomics Reveals Differences in Molecular Immunity between Min and Large White Pig Breeds
por: Yang, Liyu, et al.
Publicado: (2022)

Copy number variation-based genome wide association study reveals additional variants contributing to meat quality in Swine
por: Wang, Ligang, et al.
Publicado: (2015)

Genome-Wide Profiling of the Microrna Transcriptome Regulatory Network to Identify Putative Candidate Genes Associated with Backfat Deposition in Pigs
por: Liu, Xin, et al.
Publicado: (2019)

Genome-Wide Association Analysis Identified BMPR1A as a Novel Candidate Gene Affecting the Number of Thoracic Vertebrae in a Large White × Minzhu Intercross Pig Population
por: Liu, Qian, et al.
Publicado: (2020)

Genome-Wide Expression Profiling of mRNAs, lncRNAs and circRNAs in Skeletal Muscle of Two Different Pig Breeds
por: Hou, Xinhua, et al.
Publicado: (2021)

Genome-wide association study for intramuscular fat content in Chinese Lulai black pigs
por: Wang, Yanping, et al.
Publicado: (2019)

Identification and functional prediction of long noncoding RNAs related to intramuscular fat content in Laiwu pigs
por: Wang, Lixue, et al.
Publicado: (2022)

Genome-Wide Copy Number Variations Inferred from SNP Genotyping Arrays Using a Large White and Minzhu Intercross Population
por: Wang, Ligang, et al.
Publicado: (2013)

Systematic Identification and Comparison of the Expressed Profiles of lncRNAs, miRNAs, circRNAs, and mRNAs with Associated Co-Expression Networks in Pigs with Low and High Intramuscular Fat
por: Cheng, Feng, et al.
Publicado: (2021)

Identification of SNPs and Candidate Genes for Milk Production Ability in Yorkshire Pigs
por: Shi, Lijun, et al.
Publicado: (2021)

Copy Number Variations in Alternative Splicing Gene Networks Impact Lifespan
por: Glessner, Joseph T., et al.
Publicado: (2013)

Associations of genome-wide structural variations with phenotypic differences in cross-bred Eurasian pigs
por: Zong, Wencheng, et al.
Publicado: (2023)

Integrated Analysis of Long Non-Coding RNA and mRNA to Reveal Putative Candidate Genes Associated with Backfat Quality in Beijing Black Pig
por: Liu, Xin, et al.
Publicado: (2022)

Genes Related to Fat Metabolism in Pigs and Intramuscular Fat Content of Pork: A Focus on Nutrigenetics and Nutrigenomics
por: Malgwi, Isaac Hyeladi, et al.
Publicado: (2022)

Estimation of inbreeding and identification of regions under heavy selection based on runs of homozygosity in a Large White pig population
por: Shi, Liangyu, et al.
Publicado: (2020)

Linoleic acid metabolic pathway allows for an efficient increase of intramuscular fat content in pigs
por: Gol, Sofia, et al.
Publicado: (2019)

Muscle Transcriptome Analysis Reveals Potential Candidate Genes and Pathways Affecting Intramuscular Fat Content in Pigs
por: Zhao, Xueyan, et al.
Publicado: (2020)

The landscape of chromatin accessibility in skeletal muscle during embryonic development in pigs
por: Yue, Jingwei, et al.
Publicado: (2021)

Association of Twelve Candidate Gene Polymorphisms with the Intramuscular Fat Content and Average Backfat Thickness of Chinese Suhuai Pigs
por: Wang, Binbin, et al.
Publicado: (2019)

Identification of genes related to intramuscular fat content of pigs using genome-wide association study
por: Won, Sohyoung, et al.
Publicado: (2018)

Dynamic transcriptome and DNA methylome analyses on longissimus dorsi to identify genes underlying intramuscular fat content in pigs
por: Wang, Yuding, et al.
Publicado: (2017)

Identification of Candidate Circular RNAs Underlying Intramuscular Fat Content in the Donkey
por: Li, Bojiang, et al.
Publicado: (2020)

Effects of Choline on Meat Quality and Intramuscular Fat in Intrauterine Growth Retardation Pigs
por: Li, Bo, et al.
Publicado: (2015)

Integration of ATAC-seq and RNA-seq analysis identifies key genes affecting intramuscular fat content in pigs
por: Xu, Zhong, et al.
Publicado: (2022)

Identification and Functional Analysis of Long Intergenic Non-coding RNAs Underlying Intramuscular Fat Content in Pigs
por: Zou, Cheng, et al.
Publicado: (2018)

Association of IFNA16 and TNFRSF19 Polymorphisms with Intramuscular Fat Content and Fatty Acid Composition in Pigs
por: Mekchay, Supamit, et al.
Publicado: (2022)

Liver transcriptome profiling and functional analysis of intrauterine growth restriction (IUGR) piglets reveals a genetic correction and sexual-dimorphic gene expression during postnatal development
por: Gao, Hongmei, et al.
Publicado: (2020)

Putative Regulatory Factors Associated with Intramuscular Fat Content
por: Cesar, Aline S. M., et al.
Publicado: (2015)

Detection of genome-wide copy number variations in two chicken lines divergently selected for abdominal fat content
por: Zhang, Hui, et al.
Publicado: (2014)

Identification of Potential Sex-Specific Biomarkers in Pigs with Low and High Intramuscular Fat Content Using Integrated Bioinformatics and Machine Learning
por: Yang, Yongli, et al.
Publicado: (2023)

Data Mining and Validation of AMPK Pathway as a Novel Candidate Role Affecting Intramuscular Fat Content in Pigs
por: Yao, Chaogang, et al.
Publicado: (2019)

Genome-Wide Association Studies Identify the Loci for 5 Exterior Traits in a Large White × Minzhu Pig Population
por: Wang, Ligang, et al.
Publicado: (2014)

Cannot write session to /tmp/vufind_sessions/sess_0jhbaghi37d8u7k2kt09ej2teh