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Multitask fMRI Data Classification via Group-Wise Hybrid Temporal and Spatial Sparse Representations
Task-based functional magnetic resonance imaging (tfMRI) has been widely used to induce functional brain activities corresponding to various cognitive tasks. A relatively under-explored question is whether there exist fundamental differences in fMRI signal composition patterns that can effectively c...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Society for Neuroscience
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9186416/ https://www.ncbi.nlm.nih.gov/pubmed/35606152 http://dx.doi.org/10.1523/ENEURO.0478-21.2022 |
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author | Song, Limei Ren, Yudan Hou, Yuqing He, Xiaowei Liu, Huan |
author_facet | Song, Limei Ren, Yudan Hou, Yuqing He, Xiaowei Liu, Huan |
author_sort | Song, Limei |
collection | PubMed |
description | Task-based functional magnetic resonance imaging (tfMRI) has been widely used to induce functional brain activities corresponding to various cognitive tasks. A relatively under-explored question is whether there exist fundamental differences in fMRI signal composition patterns that can effectively classify the task states of tfMRI data, furthermore, whether there exist key functional components in characterizing the diverse tfMRI signals. Recently, fMRI signal composition patterns of multiple tasks have been investigated via deep learning models, where relatively large populations of fMRI datasets are indispensable and the neurologic meaning of their results is elusive. Thus, the major challenges arise from the high dimensionality, low signal-to-noise ratio, interindividual variability, a small sample size of fMRI data, and the explainability of classification results. To address the above challenges, we proposed a computational framework based on group-wise hybrid temporal and spatial sparse representations (HTSSR) to identify and differentiate multitask fMRI signal composition patterns. Using relatively small cohorts of Human Connectome Project (HCP) tfMRI data as test-bed, the experimental results demonstrated that the multitask of fMRI data can be successfully classified with an average accuracy of 96.67%, where the key components in differentiating the multitask can be characterized, suggesting the effectiveness and explainability of the proposed method. Moreover, both task-related components and resting-state networks (RSNs) can be reliably detected. Therefore, our study proposed a novel framework that identifies the interpretable and discriminative fMRI composition patterns and can be potentially applied for controlling fMRI data quality and inferring biomarkers in brain disorders with small sample neuroimaging datasets. |
format | Online Article Text |
id | pubmed-9186416 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Society for Neuroscience |
record_format | MEDLINE/PubMed |
spelling | pubmed-91864162022-06-13 Multitask fMRI Data Classification via Group-Wise Hybrid Temporal and Spatial Sparse Representations Song, Limei Ren, Yudan Hou, Yuqing He, Xiaowei Liu, Huan eNeuro Research Article: Methods/New Tools Task-based functional magnetic resonance imaging (tfMRI) has been widely used to induce functional brain activities corresponding to various cognitive tasks. A relatively under-explored question is whether there exist fundamental differences in fMRI signal composition patterns that can effectively classify the task states of tfMRI data, furthermore, whether there exist key functional components in characterizing the diverse tfMRI signals. Recently, fMRI signal composition patterns of multiple tasks have been investigated via deep learning models, where relatively large populations of fMRI datasets are indispensable and the neurologic meaning of their results is elusive. Thus, the major challenges arise from the high dimensionality, low signal-to-noise ratio, interindividual variability, a small sample size of fMRI data, and the explainability of classification results. To address the above challenges, we proposed a computational framework based on group-wise hybrid temporal and spatial sparse representations (HTSSR) to identify and differentiate multitask fMRI signal composition patterns. Using relatively small cohorts of Human Connectome Project (HCP) tfMRI data as test-bed, the experimental results demonstrated that the multitask of fMRI data can be successfully classified with an average accuracy of 96.67%, where the key components in differentiating the multitask can be characterized, suggesting the effectiveness and explainability of the proposed method. Moreover, both task-related components and resting-state networks (RSNs) can be reliably detected. Therefore, our study proposed a novel framework that identifies the interpretable and discriminative fMRI composition patterns and can be potentially applied for controlling fMRI data quality and inferring biomarkers in brain disorders with small sample neuroimaging datasets. Society for Neuroscience 2022-06-03 /pmc/articles/PMC9186416/ /pubmed/35606152 http://dx.doi.org/10.1523/ENEURO.0478-21.2022 Text en Copyright © 2022 Song et al. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution 4.0 International license (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution and reproduction in any medium provided that the original work is properly attributed. |
spellingShingle | Research Article: Methods/New Tools Song, Limei Ren, Yudan Hou, Yuqing He, Xiaowei Liu, Huan Multitask fMRI Data Classification via Group-Wise Hybrid Temporal and Spatial Sparse Representations |
title | Multitask fMRI Data Classification via Group-Wise Hybrid Temporal and Spatial Sparse Representations |
title_full | Multitask fMRI Data Classification via Group-Wise Hybrid Temporal and Spatial Sparse Representations |
title_fullStr | Multitask fMRI Data Classification via Group-Wise Hybrid Temporal and Spatial Sparse Representations |
title_full_unstemmed | Multitask fMRI Data Classification via Group-Wise Hybrid Temporal and Spatial Sparse Representations |
title_short | Multitask fMRI Data Classification via Group-Wise Hybrid Temporal and Spatial Sparse Representations |
title_sort | multitask fmri data classification via group-wise hybrid temporal and spatial sparse representations |
topic | Research Article: Methods/New Tools |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9186416/ https://www.ncbi.nlm.nih.gov/pubmed/35606152 http://dx.doi.org/10.1523/ENEURO.0478-21.2022 |
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