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Clinical prediction system of complications among patients with COVID-19: A development and validation retrospective multicentre study during first wave of the pandemic

Clinical evidence suggests that some patients diagnosed with coronavirus disease 2019 (COVID-19) experience a variety of complications associated with significant morbidity, especially in severe cases during the initial spread of the pandemic. To support early interventions, we propose a machine lea...

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Autores principales: Ghosheh, Ghadeer O., Alamad, Bana, Yang, Kai-Wen, Syed, Faisil, Hayat, Nasir, Iqbal, Imran, Al Kindi, Fatima, Al Junaibi, Sara, Al Safi, Maha, Ali, Raghib, Zaher, Walid, Al Harbi, Mariam, Shamout, Farah E.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: The Authors. Published by Elsevier B.V. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9188985/
https://www.ncbi.nlm.nih.gov/pubmed/35721825
http://dx.doi.org/10.1016/j.ibmed.2022.100065
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author Ghosheh, Ghadeer O.
Alamad, Bana
Yang, Kai-Wen
Syed, Faisil
Hayat, Nasir
Iqbal, Imran
Al Kindi, Fatima
Al Junaibi, Sara
Al Safi, Maha
Ali, Raghib
Zaher, Walid
Al Harbi, Mariam
Shamout, Farah E.
author_facet Ghosheh, Ghadeer O.
Alamad, Bana
Yang, Kai-Wen
Syed, Faisil
Hayat, Nasir
Iqbal, Imran
Al Kindi, Fatima
Al Junaibi, Sara
Al Safi, Maha
Ali, Raghib
Zaher, Walid
Al Harbi, Mariam
Shamout, Farah E.
author_sort Ghosheh, Ghadeer O.
collection PubMed
description Clinical evidence suggests that some patients diagnosed with coronavirus disease 2019 (COVID-19) experience a variety of complications associated with significant morbidity, especially in severe cases during the initial spread of the pandemic. To support early interventions, we propose a machine learning system that predicts the risk of developing multiple complications. We processed data collected from 3,352 patient encounters admitted to 18 facilities between April 1 and April 30, 2020, in Abu Dhabi (AD), United Arab Emirates. Using data collected during the first 24 h of admission, we trained machine learning models to predict the risk of developing any of three complications after 24 h of admission. The complications include Secondary Bacterial Infection (SBI), Acute Kidney Injury (AKI), and Acute Respiratory Distress Syndrome (ARDS). The hospitals were grouped based on geographical proximity to assess the proposed system's learning generalizability, AD Middle region and AD Western & Eastern regions, A and B, respectively. The overall system includes a data filtering criterion, hyperparameter tuning, and model selection. In test set A, consisting of 587 patient encounters (mean age: 45.5), the system achieved a good area under the receiver operating curve (AUROC) for the prediction of SBI (0.902 AUROC), AKI (0.906 AUROC), and ARDS (0.854 AUROC). Similarly, in test set B, consisting of 225 patient encounters (mean age: 42.7), the system performed well for the prediction of SBI (0.859 AUROC), AKI (0.891 AUROC), and ARDS (0.827 AUROC). The performance results and feature importance analysis highlight the system's generalizability and interpretability. The findings illustrate how machine learning models can achieve a strong performance even when using a limited set of routine input variables. Since our proposed system is data-driven, we believe it can be easily repurposed for different outcomes considering the changes in COVID-19 variants over time.
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spelling pubmed-91889852022-06-13 Clinical prediction system of complications among patients with COVID-19: A development and validation retrospective multicentre study during first wave of the pandemic Ghosheh, Ghadeer O. Alamad, Bana Yang, Kai-Wen Syed, Faisil Hayat, Nasir Iqbal, Imran Al Kindi, Fatima Al Junaibi, Sara Al Safi, Maha Ali, Raghib Zaher, Walid Al Harbi, Mariam Shamout, Farah E. Intell Based Med Article Clinical evidence suggests that some patients diagnosed with coronavirus disease 2019 (COVID-19) experience a variety of complications associated with significant morbidity, especially in severe cases during the initial spread of the pandemic. To support early interventions, we propose a machine learning system that predicts the risk of developing multiple complications. We processed data collected from 3,352 patient encounters admitted to 18 facilities between April 1 and April 30, 2020, in Abu Dhabi (AD), United Arab Emirates. Using data collected during the first 24 h of admission, we trained machine learning models to predict the risk of developing any of three complications after 24 h of admission. The complications include Secondary Bacterial Infection (SBI), Acute Kidney Injury (AKI), and Acute Respiratory Distress Syndrome (ARDS). The hospitals were grouped based on geographical proximity to assess the proposed system's learning generalizability, AD Middle region and AD Western & Eastern regions, A and B, respectively. The overall system includes a data filtering criterion, hyperparameter tuning, and model selection. In test set A, consisting of 587 patient encounters (mean age: 45.5), the system achieved a good area under the receiver operating curve (AUROC) for the prediction of SBI (0.902 AUROC), AKI (0.906 AUROC), and ARDS (0.854 AUROC). Similarly, in test set B, consisting of 225 patient encounters (mean age: 42.7), the system performed well for the prediction of SBI (0.859 AUROC), AKI (0.891 AUROC), and ARDS (0.827 AUROC). The performance results and feature importance analysis highlight the system's generalizability and interpretability. The findings illustrate how machine learning models can achieve a strong performance even when using a limited set of routine input variables. Since our proposed system is data-driven, we believe it can be easily repurposed for different outcomes considering the changes in COVID-19 variants over time. The Authors. Published by Elsevier B.V. 2022 2022-06-13 /pmc/articles/PMC9188985/ /pubmed/35721825 http://dx.doi.org/10.1016/j.ibmed.2022.100065 Text en © 2022 The Authors Since January 2020 Elsevier has created a COVID-19 resource centre with free information in English and Mandarin on the novel coronavirus COVID-19. The COVID-19 resource centre is hosted on Elsevier Connect, the company's public news and information website. Elsevier hereby grants permission to make all its COVID-19-related research that is available on the COVID-19 resource centre - including this research content - immediately available in PubMed Central and other publicly funded repositories, such as the WHO COVID database with rights for unrestricted research re-use and analyses in any form or by any means with acknowledgement of the original source. These permissions are granted for free by Elsevier for as long as the COVID-19 resource centre remains active.
spellingShingle Article
Ghosheh, Ghadeer O.
Alamad, Bana
Yang, Kai-Wen
Syed, Faisil
Hayat, Nasir
Iqbal, Imran
Al Kindi, Fatima
Al Junaibi, Sara
Al Safi, Maha
Ali, Raghib
Zaher, Walid
Al Harbi, Mariam
Shamout, Farah E.
Clinical prediction system of complications among patients with COVID-19: A development and validation retrospective multicentre study during first wave of the pandemic
title Clinical prediction system of complications among patients with COVID-19: A development and validation retrospective multicentre study during first wave of the pandemic
title_full Clinical prediction system of complications among patients with COVID-19: A development and validation retrospective multicentre study during first wave of the pandemic
title_fullStr Clinical prediction system of complications among patients with COVID-19: A development and validation retrospective multicentre study during first wave of the pandemic
title_full_unstemmed Clinical prediction system of complications among patients with COVID-19: A development and validation retrospective multicentre study during first wave of the pandemic
title_short Clinical prediction system of complications among patients with COVID-19: A development and validation retrospective multicentre study during first wave of the pandemic
title_sort clinical prediction system of complications among patients with covid-19: a development and validation retrospective multicentre study during first wave of the pandemic
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9188985/
https://www.ncbi.nlm.nih.gov/pubmed/35721825
http://dx.doi.org/10.1016/j.ibmed.2022.100065
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