Cargando…

Optogenetic actuator – ERK biosensor circuits identify MAPK network nodes that shape ERK dynamics

Combining single‐cell measurements of ERK activity dynamics with perturbations provides insights into the MAPK network topology. We built circuits consisting of an optogenetic actuator to activate MAPK signaling and an ERK biosensor to measure single‐cell ERK dynamics. This allowed us to conduct RNA...

Descripción completa

Detalles Bibliográficos
Autores principales: Dessauges, Coralie, Mikelson, Jan, Dobrzyński, Maciej, Jacques, Marc‐Antoine, Frismantiene, Agne, Gagliardi, Paolo Armando, Khammash, Mustafa, Pertz, Olivier
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9189677/
https://www.ncbi.nlm.nih.gov/pubmed/35694820
http://dx.doi.org/10.15252/msb.202110670
_version_ 1784725639973044224
author Dessauges, Coralie
Mikelson, Jan
Dobrzyński, Maciej
Jacques, Marc‐Antoine
Frismantiene, Agne
Gagliardi, Paolo Armando
Khammash, Mustafa
Pertz, Olivier
author_facet Dessauges, Coralie
Mikelson, Jan
Dobrzyński, Maciej
Jacques, Marc‐Antoine
Frismantiene, Agne
Gagliardi, Paolo Armando
Khammash, Mustafa
Pertz, Olivier
author_sort Dessauges, Coralie
collection PubMed
description Combining single‐cell measurements of ERK activity dynamics with perturbations provides insights into the MAPK network topology. We built circuits consisting of an optogenetic actuator to activate MAPK signaling and an ERK biosensor to measure single‐cell ERK dynamics. This allowed us to conduct RNAi screens to investigate the role of 50 MAPK proteins in ERK dynamics. We found that the MAPK network is robust against most node perturbations. We observed that the ERK‐RAF and the ERK‐RSK2‐SOS negative feedback operate simultaneously to regulate ERK dynamics. Bypassing the RSK2‐mediated feedback, either by direct optogenetic activation of RAS, or by RSK2 perturbation, sensitized ERK dynamics to further perturbations. Similarly, targeting this feedback in a human ErbB2‐dependent oncogenic signaling model increased the efficiency of a MEK inhibitor. The RSK2‐mediated feedback is thus important for the ability of the MAPK network to produce consistent ERK outputs, and its perturbation can enhance the efficiency of MAPK inhibitors.
format Online
Article
Text
id pubmed-9189677
institution National Center for Biotechnology Information
language English
publishDate 2022
publisher John Wiley and Sons Inc.
record_format MEDLINE/PubMed
spelling pubmed-91896772022-06-16 Optogenetic actuator – ERK biosensor circuits identify MAPK network nodes that shape ERK dynamics Dessauges, Coralie Mikelson, Jan Dobrzyński, Maciej Jacques, Marc‐Antoine Frismantiene, Agne Gagliardi, Paolo Armando Khammash, Mustafa Pertz, Olivier Mol Syst Biol Articles Combining single‐cell measurements of ERK activity dynamics with perturbations provides insights into the MAPK network topology. We built circuits consisting of an optogenetic actuator to activate MAPK signaling and an ERK biosensor to measure single‐cell ERK dynamics. This allowed us to conduct RNAi screens to investigate the role of 50 MAPK proteins in ERK dynamics. We found that the MAPK network is robust against most node perturbations. We observed that the ERK‐RAF and the ERK‐RSK2‐SOS negative feedback operate simultaneously to regulate ERK dynamics. Bypassing the RSK2‐mediated feedback, either by direct optogenetic activation of RAS, or by RSK2 perturbation, sensitized ERK dynamics to further perturbations. Similarly, targeting this feedback in a human ErbB2‐dependent oncogenic signaling model increased the efficiency of a MEK inhibitor. The RSK2‐mediated feedback is thus important for the ability of the MAPK network to produce consistent ERK outputs, and its perturbation can enhance the efficiency of MAPK inhibitors. John Wiley and Sons Inc. 2022-06-13 /pmc/articles/PMC9189677/ /pubmed/35694820 http://dx.doi.org/10.15252/msb.202110670 Text en © 2022 The Authors. Published under the terms of the CC BY 4.0 license https://creativecommons.org/licenses/by/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Articles
Dessauges, Coralie
Mikelson, Jan
Dobrzyński, Maciej
Jacques, Marc‐Antoine
Frismantiene, Agne
Gagliardi, Paolo Armando
Khammash, Mustafa
Pertz, Olivier
Optogenetic actuator – ERK biosensor circuits identify MAPK network nodes that shape ERK dynamics
title Optogenetic actuator – ERK biosensor circuits identify MAPK network nodes that shape ERK dynamics
title_full Optogenetic actuator – ERK biosensor circuits identify MAPK network nodes that shape ERK dynamics
title_fullStr Optogenetic actuator – ERK biosensor circuits identify MAPK network nodes that shape ERK dynamics
title_full_unstemmed Optogenetic actuator – ERK biosensor circuits identify MAPK network nodes that shape ERK dynamics
title_short Optogenetic actuator – ERK biosensor circuits identify MAPK network nodes that shape ERK dynamics
title_sort optogenetic actuator – erk biosensor circuits identify mapk network nodes that shape erk dynamics
topic Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9189677/
https://www.ncbi.nlm.nih.gov/pubmed/35694820
http://dx.doi.org/10.15252/msb.202110670
work_keys_str_mv AT dessaugescoralie optogeneticactuatorerkbiosensorcircuitsidentifymapknetworknodesthatshapeerkdynamics
AT mikelsonjan optogeneticactuatorerkbiosensorcircuitsidentifymapknetworknodesthatshapeerkdynamics
AT dobrzynskimaciej optogeneticactuatorerkbiosensorcircuitsidentifymapknetworknodesthatshapeerkdynamics
AT jacquesmarcantoine optogeneticactuatorerkbiosensorcircuitsidentifymapknetworknodesthatshapeerkdynamics
AT frismantieneagne optogeneticactuatorerkbiosensorcircuitsidentifymapknetworknodesthatshapeerkdynamics
AT gagliardipaoloarmando optogeneticactuatorerkbiosensorcircuitsidentifymapknetworknodesthatshapeerkdynamics
AT khammashmustafa optogeneticactuatorerkbiosensorcircuitsidentifymapknetworknodesthatshapeerkdynamics
AT pertzolivier optogeneticactuatorerkbiosensorcircuitsidentifymapknetworknodesthatshapeerkdynamics