Nezzle: an interactive and programmable visualization of biological networks in Python

SUMMARY: High-quality visualization of biological networks often requires both manual curation for proper alignment and programming to map external data to the graphical components. Nezzle is a network visualization software written in Python, which provides programmable and interactive interfaces f...

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Detalles Bibliográficos
Autor principal: Lee, Daewon
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2022
Materias:
Applications Notes
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9191205/
https://www.ncbi.nlm.nih.gov/pubmed/35552638
http://dx.doi.org/10.1093/bioinformatics/btac324
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author Lee, Daewon
author_facet Lee, Daewon
author_sort Lee, Daewon
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description SUMMARY: High-quality visualization of biological networks often requires both manual curation for proper alignment and programming to map external data to the graphical components. Nezzle is a network visualization software written in Python, which provides programmable and interactive interfaces for facilitating both manual and automatic curation of the graphical components of networks to create high-quality figures. AVAILABILITY AND IMPLEMENTATION: Nezzle is an open-source project under MIT license and is available from https://github.com/dwgoon/nezzle. SUPPLEMENTARY INFORMATION: Supplementary data are available at Bioinformatics online.
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spelling pubmed-91912052022-06-14 Nezzle: an interactive and programmable visualization of biological networks in Python Lee, Daewon Bioinformatics Applications Notes SUMMARY: High-quality visualization of biological networks often requires both manual curation for proper alignment and programming to map external data to the graphical components. Nezzle is a network visualization software written in Python, which provides programmable and interactive interfaces for facilitating both manual and automatic curation of the graphical components of networks to create high-quality figures. AVAILABILITY AND IMPLEMENTATION: Nezzle is an open-source project under MIT license and is available from https://github.com/dwgoon/nezzle. SUPPLEMENTARY INFORMATION: Supplementary data are available at Bioinformatics online. Oxford University Press 2022-05-13 /pmc/articles/PMC9191205/ /pubmed/35552638 http://dx.doi.org/10.1093/bioinformatics/btac324 Text en © The Author(s) 2022. Published by Oxford University Press. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Applications Notes
Lee, Daewon
Nezzle: an interactive and programmable visualization of biological networks in Python
title Nezzle: an interactive and programmable visualization of biological networks in Python
title_full Nezzle: an interactive and programmable visualization of biological networks in Python
title_fullStr Nezzle: an interactive and programmable visualization of biological networks in Python
title_full_unstemmed Nezzle: an interactive and programmable visualization of biological networks in Python
title_short Nezzle: an interactive and programmable visualization of biological networks in Python
title_sort nezzle: an interactive and programmable visualization of biological networks in python
topic Applications Notes
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9191205/
https://www.ncbi.nlm.nih.gov/pubmed/35552638
http://dx.doi.org/10.1093/bioinformatics/btac324
work_keys_str_mv AT leedaewon nezzleaninteractiveandprogrammablevisualizationofbiologicalnetworksinpython

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