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Comprehensive Analysis of a Cancer-Immunity Cycle–Based Signature for Predicting Prognosis and Immunotherapy Response in Patients With Colorectal Cancer

Immune checkpoint blockade (ICB) has been recognized as a promising immunotherapy for colorectal cancer (CRC); however, most patients have little or no clinical benefit. This study aimed to develop a novel cancer-immunity cycle–based signature to stratify prognosis of patients with CRC and predict e...

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Autores principales: Hou, Yufang, Zhang, Rixin, Zong, Jinbao, Wang, Weiqi, Zhou, Mingxuan, Yan, Zheng, Li, Tiegang, Gan, Wenqiang, Lv, Silin, Zeng, Zifan, Yang, Min
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9193226/
https://www.ncbi.nlm.nih.gov/pubmed/35711437
http://dx.doi.org/10.3389/fimmu.2022.892512
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author Hou, Yufang
Zhang, Rixin
Zong, Jinbao
Wang, Weiqi
Zhou, Mingxuan
Yan, Zheng
Li, Tiegang
Gan, Wenqiang
Lv, Silin
Zeng, Zifan
Yang, Min
author_facet Hou, Yufang
Zhang, Rixin
Zong, Jinbao
Wang, Weiqi
Zhou, Mingxuan
Yan, Zheng
Li, Tiegang
Gan, Wenqiang
Lv, Silin
Zeng, Zifan
Yang, Min
author_sort Hou, Yufang
collection PubMed
description Immune checkpoint blockade (ICB) has been recognized as a promising immunotherapy for colorectal cancer (CRC); however, most patients have little or no clinical benefit. This study aimed to develop a novel cancer-immunity cycle–based signature to stratify prognosis of patients with CRC and predict efficacy of immunotherapy. CRC samples from The Cancer Genome Atlas (TCGA) were used as the training set, while the RNA data from Gene Expression Omnibus (GEO) data sets and real-time quantitative PCR (RT-qPCR) data from paired frozen tissues were used for validation. We built a least absolute shrinkage and selection operator (LASSO)-Cox regression model of the cancer-immunity cycle–related gene signature in CRC. Patients who scored low on the risk scale had a better prognosis than those who scored high. Notably, the signature was an independent prognostic factor in multivariate analyses, and to improve prognostic classification and forecast accuracy for individual patients, a scoring nomogram was created. The comprehensive results revealed that the low-risk patients exhibited a higher degree of immune infiltration, a higher immunoreactivity phenotype, stronger expression of immune checkpoint–associated genes, and a superior response to ICB therapy. Furthermore, the risk model was closely related to the response to multiple chemotherapeutic drugs. Overall, we developed a reliable cancer-immunity cycle–based risk model to predict the prognosis, the molecular and immune status, and the immune benefit from ICB therapy, which may contribute greatly to accurate stratification and precise immunotherapy for patients with CRC.
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spelling pubmed-91932262022-06-15 Comprehensive Analysis of a Cancer-Immunity Cycle–Based Signature for Predicting Prognosis and Immunotherapy Response in Patients With Colorectal Cancer Hou, Yufang Zhang, Rixin Zong, Jinbao Wang, Weiqi Zhou, Mingxuan Yan, Zheng Li, Tiegang Gan, Wenqiang Lv, Silin Zeng, Zifan Yang, Min Front Immunol Immunology Immune checkpoint blockade (ICB) has been recognized as a promising immunotherapy for colorectal cancer (CRC); however, most patients have little or no clinical benefit. This study aimed to develop a novel cancer-immunity cycle–based signature to stratify prognosis of patients with CRC and predict efficacy of immunotherapy. CRC samples from The Cancer Genome Atlas (TCGA) were used as the training set, while the RNA data from Gene Expression Omnibus (GEO) data sets and real-time quantitative PCR (RT-qPCR) data from paired frozen tissues were used for validation. We built a least absolute shrinkage and selection operator (LASSO)-Cox regression model of the cancer-immunity cycle–related gene signature in CRC. Patients who scored low on the risk scale had a better prognosis than those who scored high. Notably, the signature was an independent prognostic factor in multivariate analyses, and to improve prognostic classification and forecast accuracy for individual patients, a scoring nomogram was created. The comprehensive results revealed that the low-risk patients exhibited a higher degree of immune infiltration, a higher immunoreactivity phenotype, stronger expression of immune checkpoint–associated genes, and a superior response to ICB therapy. Furthermore, the risk model was closely related to the response to multiple chemotherapeutic drugs. Overall, we developed a reliable cancer-immunity cycle–based risk model to predict the prognosis, the molecular and immune status, and the immune benefit from ICB therapy, which may contribute greatly to accurate stratification and precise immunotherapy for patients with CRC. Frontiers Media S.A. 2022-05-31 /pmc/articles/PMC9193226/ /pubmed/35711437 http://dx.doi.org/10.3389/fimmu.2022.892512 Text en Copyright © 2022 Hou, Zhang, Zong, Wang, Zhou, Yan, Li, Gan, Lv, Zeng and Yang https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Immunology
Hou, Yufang
Zhang, Rixin
Zong, Jinbao
Wang, Weiqi
Zhou, Mingxuan
Yan, Zheng
Li, Tiegang
Gan, Wenqiang
Lv, Silin
Zeng, Zifan
Yang, Min
Comprehensive Analysis of a Cancer-Immunity Cycle–Based Signature for Predicting Prognosis and Immunotherapy Response in Patients With Colorectal Cancer
title Comprehensive Analysis of a Cancer-Immunity Cycle–Based Signature for Predicting Prognosis and Immunotherapy Response in Patients With Colorectal Cancer
title_full Comprehensive Analysis of a Cancer-Immunity Cycle–Based Signature for Predicting Prognosis and Immunotherapy Response in Patients With Colorectal Cancer
title_fullStr Comprehensive Analysis of a Cancer-Immunity Cycle–Based Signature for Predicting Prognosis and Immunotherapy Response in Patients With Colorectal Cancer
title_full_unstemmed Comprehensive Analysis of a Cancer-Immunity Cycle–Based Signature for Predicting Prognosis and Immunotherapy Response in Patients With Colorectal Cancer
title_short Comprehensive Analysis of a Cancer-Immunity Cycle–Based Signature for Predicting Prognosis and Immunotherapy Response in Patients With Colorectal Cancer
title_sort comprehensive analysis of a cancer-immunity cycle–based signature for predicting prognosis and immunotherapy response in patients with colorectal cancer
topic Immunology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9193226/
https://www.ncbi.nlm.nih.gov/pubmed/35711437
http://dx.doi.org/10.3389/fimmu.2022.892512
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