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Prediction of Chlorophyll Content in Multi-Temporal Winter Wheat Based on Multispectral and Machine Learning

To obtain the canopy chlorophyll content of winter wheat in a rapid and non-destructive high-throughput manner, the study was conducted on winter wheat in Xinjiang Manas Experimental Base in 2021, and the multispectral images of two water treatments' normal irrigation (NI) and drought stress (D...

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Autores principales: Wang, Wei, Cheng, Yukun, Ren, Yi, Zhang, Zhihui, Geng, Hongwei
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9197342/
https://www.ncbi.nlm.nih.gov/pubmed/35712585
http://dx.doi.org/10.3389/fpls.2022.896408
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author Wang, Wei
Cheng, Yukun
Ren, Yi
Zhang, Zhihui
Geng, Hongwei
author_facet Wang, Wei
Cheng, Yukun
Ren, Yi
Zhang, Zhihui
Geng, Hongwei
author_sort Wang, Wei
collection PubMed
description To obtain the canopy chlorophyll content of winter wheat in a rapid and non-destructive high-throughput manner, the study was conducted on winter wheat in Xinjiang Manas Experimental Base in 2021, and the multispectral images of two water treatments' normal irrigation (NI) and drought stress (DS) in three key fertility stages (heading, flowering, and filling) of winter wheat were obtained by DJI P4M unmanned aerial vehicle (UAV). The flag leaf chlorophyll content (CC) data of different genotypes in the field were obtained by SPAD-502 Plus chlorophyll meter. Firstly, the CC distribution of different genotypes was studied, then, 13 vegetation indices, combined with the Random Forest algorithm and correlation evaluation of CC, and 14 vegetation indices were used for vegetation index preference. Finally, preferential vegetation indices and nine machine learning algorithms, Ridge regression with cross-validation (RidgeCV), Ridge, Adaboost Regression, Bagging_Regressor, K_Neighbor, Gradient_Boosting_Regressor, Random Forest, Support Vector Machine (SVM), and Least absolute shrinkage and selection operator (Lasso), were preferentially selected to construct the CC estimation models under two water treatments at three different fertility stages, which were evaluated by correlation coefficient (r), root means square error (RMSE) and the normalized root mean square error (NRMSE) to select the optimal estimation model. The results showed that the CC values under normal irrigation were higher than those underwater limitation treatment at different fertility stages; several vegetation indices and CC values showed a highly significant correlation, with the highest correlation reaching.51; in the prediction model construction of CC values, different models under normal irrigation and water limitation treatment had high estimation accuracy, among which the model with the highest prediction accuracy under normal irrigation was at the heading stage. The highest precision of the model prediction under normal irrigation was in the RidgeCV model (r = 0.63, RMSE = 3.28, NRMSE = 16.2%) and the highest precision of the model prediction under water limitation treatment was in the SVM model (r = 0.63, RMSE = 3.47, NRMSE = 19.2%).
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spelling pubmed-91973422022-06-15 Prediction of Chlorophyll Content in Multi-Temporal Winter Wheat Based on Multispectral and Machine Learning Wang, Wei Cheng, Yukun Ren, Yi Zhang, Zhihui Geng, Hongwei Front Plant Sci Plant Science To obtain the canopy chlorophyll content of winter wheat in a rapid and non-destructive high-throughput manner, the study was conducted on winter wheat in Xinjiang Manas Experimental Base in 2021, and the multispectral images of two water treatments' normal irrigation (NI) and drought stress (DS) in three key fertility stages (heading, flowering, and filling) of winter wheat were obtained by DJI P4M unmanned aerial vehicle (UAV). The flag leaf chlorophyll content (CC) data of different genotypes in the field were obtained by SPAD-502 Plus chlorophyll meter. Firstly, the CC distribution of different genotypes was studied, then, 13 vegetation indices, combined with the Random Forest algorithm and correlation evaluation of CC, and 14 vegetation indices were used for vegetation index preference. Finally, preferential vegetation indices and nine machine learning algorithms, Ridge regression with cross-validation (RidgeCV), Ridge, Adaboost Regression, Bagging_Regressor, K_Neighbor, Gradient_Boosting_Regressor, Random Forest, Support Vector Machine (SVM), and Least absolute shrinkage and selection operator (Lasso), were preferentially selected to construct the CC estimation models under two water treatments at three different fertility stages, which were evaluated by correlation coefficient (r), root means square error (RMSE) and the normalized root mean square error (NRMSE) to select the optimal estimation model. The results showed that the CC values under normal irrigation were higher than those underwater limitation treatment at different fertility stages; several vegetation indices and CC values showed a highly significant correlation, with the highest correlation reaching.51; in the prediction model construction of CC values, different models under normal irrigation and water limitation treatment had high estimation accuracy, among which the model with the highest prediction accuracy under normal irrigation was at the heading stage. The highest precision of the model prediction under normal irrigation was in the RidgeCV model (r = 0.63, RMSE = 3.28, NRMSE = 16.2%) and the highest precision of the model prediction under water limitation treatment was in the SVM model (r = 0.63, RMSE = 3.47, NRMSE = 19.2%). Frontiers Media S.A. 2022-05-27 /pmc/articles/PMC9197342/ /pubmed/35712585 http://dx.doi.org/10.3389/fpls.2022.896408 Text en Copyright © 2022 Wang, Cheng, Ren, Zhang and Geng. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Plant Science
Wang, Wei
Cheng, Yukun
Ren, Yi
Zhang, Zhihui
Geng, Hongwei
Prediction of Chlorophyll Content in Multi-Temporal Winter Wheat Based on Multispectral and Machine Learning
title Prediction of Chlorophyll Content in Multi-Temporal Winter Wheat Based on Multispectral and Machine Learning
title_full Prediction of Chlorophyll Content in Multi-Temporal Winter Wheat Based on Multispectral and Machine Learning
title_fullStr Prediction of Chlorophyll Content in Multi-Temporal Winter Wheat Based on Multispectral and Machine Learning
title_full_unstemmed Prediction of Chlorophyll Content in Multi-Temporal Winter Wheat Based on Multispectral and Machine Learning
title_short Prediction of Chlorophyll Content in Multi-Temporal Winter Wheat Based on Multispectral and Machine Learning
title_sort prediction of chlorophyll content in multi-temporal winter wheat based on multispectral and machine learning
topic Plant Science
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9197342/
https://www.ncbi.nlm.nih.gov/pubmed/35712585
http://dx.doi.org/10.3389/fpls.2022.896408
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