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Automated detection and segmentation of non-small cell lung cancer computed tomography images

Detection and segmentation of abnormalities on medical images is highly important for patient management including diagnosis, radiotherapy, response evaluation, as well as for quantitative image research. We present a fully automated pipeline for the detection and volumetric segmentation of non-smal...

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Autores principales: Primakov, Sergey P., Ibrahim, Abdalla, van Timmeren, Janita E., Wu, Guangyao, Keek, Simon A., Beuque, Manon, Granzier, Renée W. Y., Lavrova, Elizaveta, Scrivener, Madeleine, Sanduleanu, Sebastian, Kayan, Esma, Halilaj, Iva, Lenaers, Anouk, Wu, Jianlin, Monshouwer, René, Geets, Xavier, Gietema, Hester A., Hendriks, Lizza E. L., Morin, Olivier, Jochems, Arthur, Woodruff, Henry C., Lambin, Philippe
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9198097/
https://www.ncbi.nlm.nih.gov/pubmed/35701415
http://dx.doi.org/10.1038/s41467-022-30841-3
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author Primakov, Sergey P.
Ibrahim, Abdalla
van Timmeren, Janita E.
Wu, Guangyao
Keek, Simon A.
Beuque, Manon
Granzier, Renée W. Y.
Lavrova, Elizaveta
Scrivener, Madeleine
Sanduleanu, Sebastian
Kayan, Esma
Halilaj, Iva
Lenaers, Anouk
Wu, Jianlin
Monshouwer, René
Geets, Xavier
Gietema, Hester A.
Hendriks, Lizza E. L.
Morin, Olivier
Jochems, Arthur
Woodruff, Henry C.
Lambin, Philippe
author_facet Primakov, Sergey P.
Ibrahim, Abdalla
van Timmeren, Janita E.
Wu, Guangyao
Keek, Simon A.
Beuque, Manon
Granzier, Renée W. Y.
Lavrova, Elizaveta
Scrivener, Madeleine
Sanduleanu, Sebastian
Kayan, Esma
Halilaj, Iva
Lenaers, Anouk
Wu, Jianlin
Monshouwer, René
Geets, Xavier
Gietema, Hester A.
Hendriks, Lizza E. L.
Morin, Olivier
Jochems, Arthur
Woodruff, Henry C.
Lambin, Philippe
author_sort Primakov, Sergey P.
collection PubMed
description Detection and segmentation of abnormalities on medical images is highly important for patient management including diagnosis, radiotherapy, response evaluation, as well as for quantitative image research. We present a fully automated pipeline for the detection and volumetric segmentation of non-small cell lung cancer (NSCLC) developed and validated on 1328 thoracic CT scans from 8 institutions. Along with quantitative performance detailed by image slice thickness, tumor size, image interpretation difficulty, and tumor location, we report an in-silico prospective clinical trial, where we show that the proposed method is faster and more reproducible compared to the experts. Moreover, we demonstrate that on average, radiologists & radiation oncologists preferred automatic segmentations in 56% of the cases. Additionally, we evaluate the prognostic power of the automatic contours by applying RECIST criteria and measuring the tumor volumes. Segmentations by our method stratified patients into low and high survival groups with higher significance compared to those methods based on manual contours.
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spelling pubmed-91980972022-06-16 Automated detection and segmentation of non-small cell lung cancer computed tomography images Primakov, Sergey P. Ibrahim, Abdalla van Timmeren, Janita E. Wu, Guangyao Keek, Simon A. Beuque, Manon Granzier, Renée W. Y. Lavrova, Elizaveta Scrivener, Madeleine Sanduleanu, Sebastian Kayan, Esma Halilaj, Iva Lenaers, Anouk Wu, Jianlin Monshouwer, René Geets, Xavier Gietema, Hester A. Hendriks, Lizza E. L. Morin, Olivier Jochems, Arthur Woodruff, Henry C. Lambin, Philippe Nat Commun Article Detection and segmentation of abnormalities on medical images is highly important for patient management including diagnosis, radiotherapy, response evaluation, as well as for quantitative image research. We present a fully automated pipeline for the detection and volumetric segmentation of non-small cell lung cancer (NSCLC) developed and validated on 1328 thoracic CT scans from 8 institutions. Along with quantitative performance detailed by image slice thickness, tumor size, image interpretation difficulty, and tumor location, we report an in-silico prospective clinical trial, where we show that the proposed method is faster and more reproducible compared to the experts. Moreover, we demonstrate that on average, radiologists & radiation oncologists preferred automatic segmentations in 56% of the cases. Additionally, we evaluate the prognostic power of the automatic contours by applying RECIST criteria and measuring the tumor volumes. Segmentations by our method stratified patients into low and high survival groups with higher significance compared to those methods based on manual contours. Nature Publishing Group UK 2022-06-14 /pmc/articles/PMC9198097/ /pubmed/35701415 http://dx.doi.org/10.1038/s41467-022-30841-3 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Primakov, Sergey P.
Ibrahim, Abdalla
van Timmeren, Janita E.
Wu, Guangyao
Keek, Simon A.
Beuque, Manon
Granzier, Renée W. Y.
Lavrova, Elizaveta
Scrivener, Madeleine
Sanduleanu, Sebastian
Kayan, Esma
Halilaj, Iva
Lenaers, Anouk
Wu, Jianlin
Monshouwer, René
Geets, Xavier
Gietema, Hester A.
Hendriks, Lizza E. L.
Morin, Olivier
Jochems, Arthur
Woodruff, Henry C.
Lambin, Philippe
Automated detection and segmentation of non-small cell lung cancer computed tomography images
title Automated detection and segmentation of non-small cell lung cancer computed tomography images
title_full Automated detection and segmentation of non-small cell lung cancer computed tomography images
title_fullStr Automated detection and segmentation of non-small cell lung cancer computed tomography images
title_full_unstemmed Automated detection and segmentation of non-small cell lung cancer computed tomography images
title_short Automated detection and segmentation of non-small cell lung cancer computed tomography images
title_sort automated detection and segmentation of non-small cell lung cancer computed tomography images
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9198097/
https://www.ncbi.nlm.nih.gov/pubmed/35701415
http://dx.doi.org/10.1038/s41467-022-30841-3
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