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Automated detection and segmentation of non-small cell lung cancer computed tomography images
Detection and segmentation of abnormalities on medical images is highly important for patient management including diagnosis, radiotherapy, response evaluation, as well as for quantitative image research. We present a fully automated pipeline for the detection and volumetric segmentation of non-smal...
Autores principales: | , , , , , , , , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9198097/ https://www.ncbi.nlm.nih.gov/pubmed/35701415 http://dx.doi.org/10.1038/s41467-022-30841-3 |
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author | Primakov, Sergey P. Ibrahim, Abdalla van Timmeren, Janita E. Wu, Guangyao Keek, Simon A. Beuque, Manon Granzier, Renée W. Y. Lavrova, Elizaveta Scrivener, Madeleine Sanduleanu, Sebastian Kayan, Esma Halilaj, Iva Lenaers, Anouk Wu, Jianlin Monshouwer, René Geets, Xavier Gietema, Hester A. Hendriks, Lizza E. L. Morin, Olivier Jochems, Arthur Woodruff, Henry C. Lambin, Philippe |
author_facet | Primakov, Sergey P. Ibrahim, Abdalla van Timmeren, Janita E. Wu, Guangyao Keek, Simon A. Beuque, Manon Granzier, Renée W. Y. Lavrova, Elizaveta Scrivener, Madeleine Sanduleanu, Sebastian Kayan, Esma Halilaj, Iva Lenaers, Anouk Wu, Jianlin Monshouwer, René Geets, Xavier Gietema, Hester A. Hendriks, Lizza E. L. Morin, Olivier Jochems, Arthur Woodruff, Henry C. Lambin, Philippe |
author_sort | Primakov, Sergey P. |
collection | PubMed |
description | Detection and segmentation of abnormalities on medical images is highly important for patient management including diagnosis, radiotherapy, response evaluation, as well as for quantitative image research. We present a fully automated pipeline for the detection and volumetric segmentation of non-small cell lung cancer (NSCLC) developed and validated on 1328 thoracic CT scans from 8 institutions. Along with quantitative performance detailed by image slice thickness, tumor size, image interpretation difficulty, and tumor location, we report an in-silico prospective clinical trial, where we show that the proposed method is faster and more reproducible compared to the experts. Moreover, we demonstrate that on average, radiologists & radiation oncologists preferred automatic segmentations in 56% of the cases. Additionally, we evaluate the prognostic power of the automatic contours by applying RECIST criteria and measuring the tumor volumes. Segmentations by our method stratified patients into low and high survival groups with higher significance compared to those methods based on manual contours. |
format | Online Article Text |
id | pubmed-9198097 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-91980972022-06-16 Automated detection and segmentation of non-small cell lung cancer computed tomography images Primakov, Sergey P. Ibrahim, Abdalla van Timmeren, Janita E. Wu, Guangyao Keek, Simon A. Beuque, Manon Granzier, Renée W. Y. Lavrova, Elizaveta Scrivener, Madeleine Sanduleanu, Sebastian Kayan, Esma Halilaj, Iva Lenaers, Anouk Wu, Jianlin Monshouwer, René Geets, Xavier Gietema, Hester A. Hendriks, Lizza E. L. Morin, Olivier Jochems, Arthur Woodruff, Henry C. Lambin, Philippe Nat Commun Article Detection and segmentation of abnormalities on medical images is highly important for patient management including diagnosis, radiotherapy, response evaluation, as well as for quantitative image research. We present a fully automated pipeline for the detection and volumetric segmentation of non-small cell lung cancer (NSCLC) developed and validated on 1328 thoracic CT scans from 8 institutions. Along with quantitative performance detailed by image slice thickness, tumor size, image interpretation difficulty, and tumor location, we report an in-silico prospective clinical trial, where we show that the proposed method is faster and more reproducible compared to the experts. Moreover, we demonstrate that on average, radiologists & radiation oncologists preferred automatic segmentations in 56% of the cases. Additionally, we evaluate the prognostic power of the automatic contours by applying RECIST criteria and measuring the tumor volumes. Segmentations by our method stratified patients into low and high survival groups with higher significance compared to those methods based on manual contours. Nature Publishing Group UK 2022-06-14 /pmc/articles/PMC9198097/ /pubmed/35701415 http://dx.doi.org/10.1038/s41467-022-30841-3 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Article Primakov, Sergey P. Ibrahim, Abdalla van Timmeren, Janita E. Wu, Guangyao Keek, Simon A. Beuque, Manon Granzier, Renée W. Y. Lavrova, Elizaveta Scrivener, Madeleine Sanduleanu, Sebastian Kayan, Esma Halilaj, Iva Lenaers, Anouk Wu, Jianlin Monshouwer, René Geets, Xavier Gietema, Hester A. Hendriks, Lizza E. L. Morin, Olivier Jochems, Arthur Woodruff, Henry C. Lambin, Philippe Automated detection and segmentation of non-small cell lung cancer computed tomography images |
title | Automated detection and segmentation of non-small cell lung cancer computed tomography images |
title_full | Automated detection and segmentation of non-small cell lung cancer computed tomography images |
title_fullStr | Automated detection and segmentation of non-small cell lung cancer computed tomography images |
title_full_unstemmed | Automated detection and segmentation of non-small cell lung cancer computed tomography images |
title_short | Automated detection and segmentation of non-small cell lung cancer computed tomography images |
title_sort | automated detection and segmentation of non-small cell lung cancer computed tomography images |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9198097/ https://www.ncbi.nlm.nih.gov/pubmed/35701415 http://dx.doi.org/10.1038/s41467-022-30841-3 |
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