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Rule extraction from biased random forest and fuzzy support vector machine for early diagnosis of diabetes

Due to concealed initial symptoms, many diabetic patients are not diagnosed in time, which delays treatment. Machine learning methods have been applied to increase the diagnosis rate, but most of them are black boxes lacking interpretability. Rule extraction is usually used to turn on the black box....

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Autores principales: Hao, Jingwei, Luo, Senlin, Pan, Limin
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9198101/
https://www.ncbi.nlm.nih.gov/pubmed/35701587
http://dx.doi.org/10.1038/s41598-022-14143-8
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author Hao, Jingwei
Luo, Senlin
Pan, Limin
author_facet Hao, Jingwei
Luo, Senlin
Pan, Limin
author_sort Hao, Jingwei
collection PubMed
description Due to concealed initial symptoms, many diabetic patients are not diagnosed in time, which delays treatment. Machine learning methods have been applied to increase the diagnosis rate, but most of them are black boxes lacking interpretability. Rule extraction is usually used to turn on the black box. As the number of diabetic patients is far less than that of healthy people, the rules obtained by the existing rule extraction methods tend to identify healthy people rather than diabetic patients. To address the problem, a method for extracting reduced rules based on biased random forest and fuzzy support vector machine is proposed. Biased random forest uses the k-nearest neighbor (k-NN) algorithm to identify critical samples and generates more trees that tend to diagnose diabetes based on critical samples to improve the tendency of the generated rules for diabetic patients. In addition, the conditions and rules are reduced based on the error rate and coverage rate to enhance interpretability. Experiments on the Diabetes Medical Examination Data collected by Beijing Hospital (DMED-BH) dataset demonstrate that the proposed approach has outstanding results (MCC = 0.8802) when the rules are similar in number. Moreover, experiments on the Pima Indian Diabetes (PID) and China Health and Nutrition Survey (CHNS) datasets prove the generalization of the proposed method.
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spelling pubmed-91981012022-06-16 Rule extraction from biased random forest and fuzzy support vector machine for early diagnosis of diabetes Hao, Jingwei Luo, Senlin Pan, Limin Sci Rep Article Due to concealed initial symptoms, many diabetic patients are not diagnosed in time, which delays treatment. Machine learning methods have been applied to increase the diagnosis rate, but most of them are black boxes lacking interpretability. Rule extraction is usually used to turn on the black box. As the number of diabetic patients is far less than that of healthy people, the rules obtained by the existing rule extraction methods tend to identify healthy people rather than diabetic patients. To address the problem, a method for extracting reduced rules based on biased random forest and fuzzy support vector machine is proposed. Biased random forest uses the k-nearest neighbor (k-NN) algorithm to identify critical samples and generates more trees that tend to diagnose diabetes based on critical samples to improve the tendency of the generated rules for diabetic patients. In addition, the conditions and rules are reduced based on the error rate and coverage rate to enhance interpretability. Experiments on the Diabetes Medical Examination Data collected by Beijing Hospital (DMED-BH) dataset demonstrate that the proposed approach has outstanding results (MCC = 0.8802) when the rules are similar in number. Moreover, experiments on the Pima Indian Diabetes (PID) and China Health and Nutrition Survey (CHNS) datasets prove the generalization of the proposed method. Nature Publishing Group UK 2022-06-14 /pmc/articles/PMC9198101/ /pubmed/35701587 http://dx.doi.org/10.1038/s41598-022-14143-8 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Hao, Jingwei
Luo, Senlin
Pan, Limin
Rule extraction from biased random forest and fuzzy support vector machine for early diagnosis of diabetes
title Rule extraction from biased random forest and fuzzy support vector machine for early diagnosis of diabetes
title_full Rule extraction from biased random forest and fuzzy support vector machine for early diagnosis of diabetes
title_fullStr Rule extraction from biased random forest and fuzzy support vector machine for early diagnosis of diabetes
title_full_unstemmed Rule extraction from biased random forest and fuzzy support vector machine for early diagnosis of diabetes
title_short Rule extraction from biased random forest and fuzzy support vector machine for early diagnosis of diabetes
title_sort rule extraction from biased random forest and fuzzy support vector machine for early diagnosis of diabetes
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9198101/
https://www.ncbi.nlm.nih.gov/pubmed/35701587
http://dx.doi.org/10.1038/s41598-022-14143-8
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