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Functional validation of miRNA target genes in abiotic stress in Hippophae salicifolia

miRNAs are non-coding, single-stranded RNAs and are known to regulate the expression of genes during the post-transcription process. Seabuckthorn (Hippophae sp.; Elaeagnaceae) plant grows in different regions in harsh environmental conditions and is tolerant to various abiotic stress prevailing in t...

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Detalles Bibliográficos
Autores principales: Chaudhary, Parneeta, Sharma, Prakash Chand
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Biomedical Informatics 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9200607/
https://www.ncbi.nlm.nih.gov/pubmed/35815195
http://dx.doi.org/10.6026/97320630018061
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author Chaudhary, Parneeta
Sharma, Prakash Chand
author_facet Chaudhary, Parneeta
Sharma, Prakash Chand
author_sort Chaudhary, Parneeta
collection PubMed
description miRNAs are non-coding, single-stranded RNAs and are known to regulate the expression of genes during the post-transcription process. Seabuckthorn (Hippophae sp.; Elaeagnaceae) plant grows in different regions in harsh environmental conditions and is tolerant to various abiotic stress prevailing in the Indian Himalayas. Therefore, it is of interest to document the functional assignment of miRNA target genes to abiotic stress in Hippophae salicifolia using available bioinformatics tools. We identified eleven miRNA target genes in the seabuckthorn transcriptome. The expression analysis of these miRNA target genes provides important information about the regulation of stressresponsive defense mechanisms in seabuckthorn. Understanding of the role of these putative miRNAs and their target genes in cold and heat tolerance provides insights to determine the potential targets for the exploitation towards the development of stress-tolerant crop plants.
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spelling pubmed-92006072022-07-07 Functional validation of miRNA target genes in abiotic stress in Hippophae salicifolia Chaudhary, Parneeta Sharma, Prakash Chand Bioinformation Research Article miRNAs are non-coding, single-stranded RNAs and are known to regulate the expression of genes during the post-transcription process. Seabuckthorn (Hippophae sp.; Elaeagnaceae) plant grows in different regions in harsh environmental conditions and is tolerant to various abiotic stress prevailing in the Indian Himalayas. Therefore, it is of interest to document the functional assignment of miRNA target genes to abiotic stress in Hippophae salicifolia using available bioinformatics tools. We identified eleven miRNA target genes in the seabuckthorn transcriptome. The expression analysis of these miRNA target genes provides important information about the regulation of stressresponsive defense mechanisms in seabuckthorn. Understanding of the role of these putative miRNAs and their target genes in cold and heat tolerance provides insights to determine the potential targets for the exploitation towards the development of stress-tolerant crop plants. Biomedical Informatics 2022-01-31 /pmc/articles/PMC9200607/ /pubmed/35815195 http://dx.doi.org/10.6026/97320630018061 Text en © 2022 Biomedical Informatics https://creativecommons.org/licenses/by/3.0/This is an Open Access article which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly credited. This is distributed under the terms of the Creative Commons Attribution License.
spellingShingle Research Article
Chaudhary, Parneeta
Sharma, Prakash Chand
Functional validation of miRNA target genes in abiotic stress in Hippophae salicifolia
title Functional validation of miRNA target genes in abiotic stress in Hippophae salicifolia
title_full Functional validation of miRNA target genes in abiotic stress in Hippophae salicifolia
title_fullStr Functional validation of miRNA target genes in abiotic stress in Hippophae salicifolia
title_full_unstemmed Functional validation of miRNA target genes in abiotic stress in Hippophae salicifolia
title_short Functional validation of miRNA target genes in abiotic stress in Hippophae salicifolia
title_sort functional validation of mirna target genes in abiotic stress in hippophae salicifolia
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9200607/
https://www.ncbi.nlm.nih.gov/pubmed/35815195
http://dx.doi.org/10.6026/97320630018061
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