Genomic characterization of Lelliottia amnigena PTJIIT1005, a nitrate tolerant strain isolated from water sample of Yamuna River, Delhi, India

Here, we report the genome sequence of PTJIIT1005, isolated from a polluted site on the Yamuna River, Delhi. The genome is complete and consists of ~4.5 Mbp with a GC content of 52.62%, 4,259 protein-coding genes, 76 tRNAs, and 4 rRNAs. Strain PTJIIT1005 shows 98.89% average nucleotide identity (ANI...

Descripción completa

Detalles Bibliográficos
Autores principales: Thakur, Preeti, Gauba, Pammi
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Society for Microbiology 2022
Materias:
Genome Sequences
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9202406/
https://www.ncbi.nlm.nih.gov/pubmed/35616378
http://dx.doi.org/10.1128/mra.00229-22
_version_ 1784728526572748800
author Thakur, Preeti
Gauba, Pammi
author_facet Thakur, Preeti
Gauba, Pammi
author_sort Thakur, Preeti
collection PubMed
description Here, we report the genome sequence of PTJIIT1005, isolated from a polluted site on the Yamuna River, Delhi. The genome is complete and consists of ~4.5 Mbp with a GC content of 52.62%, 4,259 protein-coding genes, 76 tRNAs, and 4 rRNAs. Strain PTJIIT1005 shows 98.89% average nucleotide identity (ANI) with Lelliottia amnigena.
format Online
Article
Text
id pubmed-9202406
institution National Center for Biotechnology Information
language English
publishDate 2022
publisher American Society for Microbiology
record_format MEDLINE/PubMed
spelling pubmed-92024062022-06-17 Genomic characterization of Lelliottia amnigena PTJIIT1005, a nitrate tolerant strain isolated from water sample of Yamuna River, Delhi, India Thakur, Preeti Gauba, Pammi Microbiol Resour Announc Genome Sequences Here, we report the genome sequence of PTJIIT1005, isolated from a polluted site on the Yamuna River, Delhi. The genome is complete and consists of ~4.5 Mbp with a GC content of 52.62%, 4,259 protein-coding genes, 76 tRNAs, and 4 rRNAs. Strain PTJIIT1005 shows 98.89% average nucleotide identity (ANI) with Lelliottia amnigena. American Society for Microbiology 2022-05-26 /pmc/articles/PMC9202406/ /pubmed/35616378 http://dx.doi.org/10.1128/mra.00229-22 Text en Copyright © 2022 Thakur and Gauba. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution 4.0 International license (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Genome Sequences
Thakur, Preeti
Gauba, Pammi
Genomic characterization of Lelliottia amnigena PTJIIT1005, a nitrate tolerant strain isolated from water sample of Yamuna River, Delhi, India
title Genomic characterization of Lelliottia amnigena PTJIIT1005, a nitrate tolerant strain isolated from water sample of Yamuna River, Delhi, India
title_full Genomic characterization of Lelliottia amnigena PTJIIT1005, a nitrate tolerant strain isolated from water sample of Yamuna River, Delhi, India
title_fullStr Genomic characterization of Lelliottia amnigena PTJIIT1005, a nitrate tolerant strain isolated from water sample of Yamuna River, Delhi, India
title_full_unstemmed Genomic characterization of Lelliottia amnigena PTJIIT1005, a nitrate tolerant strain isolated from water sample of Yamuna River, Delhi, India
title_short Genomic characterization of Lelliottia amnigena PTJIIT1005, a nitrate tolerant strain isolated from water sample of Yamuna River, Delhi, India
title_sort genomic characterization of lelliottia amnigena ptjiit1005, a nitrate tolerant strain isolated from water sample of yamuna river, delhi, india
topic Genome Sequences
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9202406/
https://www.ncbi.nlm.nih.gov/pubmed/35616378
http://dx.doi.org/10.1128/mra.00229-22
work_keys_str_mv AT thakurpreeti genomiccharacterizationoflelliottiaamnigenaptjiit1005anitratetolerantstrainisolatedfromwatersampleofyamunariverdelhiindia
AT gaubapammi genomiccharacterizationoflelliottiaamnigenaptjiit1005anitratetolerantstrainisolatedfromwatersampleofyamunariverdelhiindia

Ejemplares similares