Cargando…
CF-Seq, an accessible web application for rapid re-analysis of cystic fibrosis pathogen RNA sequencing studies
Researchers studying cystic fibrosis (CF) pathogens have produced numerous RNA-seq datasets which are available in the gene expression omnibus (GEO). Although these studies are publicly available, substantial computational expertise and manual effort are required to compare similar studies, visualiz...
Autores principales: | Neff, Samuel L., Hampton, Thomas H., Puerner, Charles, Cengher, Liviu, Doing, Georgia, Lee, Alexandra J., Koeppen, Katja, Cheung, Ambrose L., Hogan, Deborah A., Cramer, Robert A., Stanton, Bruce A. |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2022
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9203545/ https://www.ncbi.nlm.nih.gov/pubmed/35710652 http://dx.doi.org/10.1038/s41597-022-01431-1 |
Ejemplares similares
-
GAUGE-Annotated Microbial Transcriptomic Data Facilitate Parallel Mining and High-Throughput Reanalysis To Form Data-Driven Hypotheses
por: Li, Zhongyou, et al.
Publicado: (2021) -
Conditional antagonism in co-cultures of Pseudomonas aeruginosa and Candida albicans: An intersection of ethanol and phosphate signaling distilled from dual-seq transcriptomics
por: Doing, Georgia, et al.
Publicado: (2020) -
Analysis of Pseudomonas aeruginosa transcription in an ex vivo cystic fibrosis sputum model identifies metal restriction as a gene expression stimulus
por: Neff, Samuel L., et al.
Publicado: (2023) -
ESKAPE Act Plus: Pathway Activation Analysis for Bacterial Pathogens
por: Koeppen, Katja, et al.
Publicado: (2022) -
Comparative effects of CFTR modulators on phagocytic, metabolic and inflammatory profiles of CF and nonCF macrophages
por: Aridgides, Daniel S., et al.
Publicado: (2023)