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Building reliable radiomic models using image perturbation
Radiomic model reliability is a central premise for its clinical translation. Presently, it is assessed using test–retest or external data, which, unfortunately, is often scarce in reality. Therefore, we aimed to develop a novel image perturbation-based method (IPBM) for the first of its kind toward...
Autores principales: | , , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9203573/ https://www.ncbi.nlm.nih.gov/pubmed/35710850 http://dx.doi.org/10.1038/s41598-022-14178-x |
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author | Teng, Xinzhi Zhang, Jiang Zwanenburg, Alex Sun, Jiachen Huang, Yuhua Lam, Saikit Zhang, Yuanpeng Li, Bing Zhou, Ta Xiao, Haonan Liu, Chenyang Li, Wen Han, Xinyang Ma, Zongrui Li, Tian Cai, Jing |
author_facet | Teng, Xinzhi Zhang, Jiang Zwanenburg, Alex Sun, Jiachen Huang, Yuhua Lam, Saikit Zhang, Yuanpeng Li, Bing Zhou, Ta Xiao, Haonan Liu, Chenyang Li, Wen Han, Xinyang Ma, Zongrui Li, Tian Cai, Jing |
author_sort | Teng, Xinzhi |
collection | PubMed |
description | Radiomic model reliability is a central premise for its clinical translation. Presently, it is assessed using test–retest or external data, which, unfortunately, is often scarce in reality. Therefore, we aimed to develop a novel image perturbation-based method (IPBM) for the first of its kind toward building a reliable radiomic model. We first developed a radiomic prognostic model for head-and-neck cancer patients on a training (70%) and evaluated on a testing (30%) cohort using C-index. Subsequently, we applied the IPBM to CT images of both cohorts (Perturbed-Train and Perturbed-Test cohort) to generate 60 additional samples for both cohorts. Model reliability was assessed using intra-class correlation coefficient (ICC) to quantify consistency of the C-index among the 60 samples in the Perturbed-Train and Perturbed-Test cohorts. Besides, we re-trained the radiomic model using reliable RFs exclusively (ICC > 0.75) to validate the IPBM. Results showed moderate model reliability in Perturbed-Train (ICC: 0.565, 95%CI 0.518–0.615) and Perturbed-Test (ICC: 0.596, 95%CI 0.527–0.670) cohorts. An enhanced reliability of the re-trained model was observed in Perturbed-Train (ICC: 0.782, 95%CI 0.759–0.815) and Perturbed-Test (ICC: 0.825, 95%CI 0.782–0.867) cohorts, indicating validity of the IPBM. To conclude, we demonstrated capability of the IPBM toward building reliable radiomic models, providing community with a novel model reliability assessment strategy prior to prospective evaluation. |
format | Online Article Text |
id | pubmed-9203573 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-92035732022-06-18 Building reliable radiomic models using image perturbation Teng, Xinzhi Zhang, Jiang Zwanenburg, Alex Sun, Jiachen Huang, Yuhua Lam, Saikit Zhang, Yuanpeng Li, Bing Zhou, Ta Xiao, Haonan Liu, Chenyang Li, Wen Han, Xinyang Ma, Zongrui Li, Tian Cai, Jing Sci Rep Article Radiomic model reliability is a central premise for its clinical translation. Presently, it is assessed using test–retest or external data, which, unfortunately, is often scarce in reality. Therefore, we aimed to develop a novel image perturbation-based method (IPBM) for the first of its kind toward building a reliable radiomic model. We first developed a radiomic prognostic model for head-and-neck cancer patients on a training (70%) and evaluated on a testing (30%) cohort using C-index. Subsequently, we applied the IPBM to CT images of both cohorts (Perturbed-Train and Perturbed-Test cohort) to generate 60 additional samples for both cohorts. Model reliability was assessed using intra-class correlation coefficient (ICC) to quantify consistency of the C-index among the 60 samples in the Perturbed-Train and Perturbed-Test cohorts. Besides, we re-trained the radiomic model using reliable RFs exclusively (ICC > 0.75) to validate the IPBM. Results showed moderate model reliability in Perturbed-Train (ICC: 0.565, 95%CI 0.518–0.615) and Perturbed-Test (ICC: 0.596, 95%CI 0.527–0.670) cohorts. An enhanced reliability of the re-trained model was observed in Perturbed-Train (ICC: 0.782, 95%CI 0.759–0.815) and Perturbed-Test (ICC: 0.825, 95%CI 0.782–0.867) cohorts, indicating validity of the IPBM. To conclude, we demonstrated capability of the IPBM toward building reliable radiomic models, providing community with a novel model reliability assessment strategy prior to prospective evaluation. Nature Publishing Group UK 2022-06-16 /pmc/articles/PMC9203573/ /pubmed/35710850 http://dx.doi.org/10.1038/s41598-022-14178-x Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Article Teng, Xinzhi Zhang, Jiang Zwanenburg, Alex Sun, Jiachen Huang, Yuhua Lam, Saikit Zhang, Yuanpeng Li, Bing Zhou, Ta Xiao, Haonan Liu, Chenyang Li, Wen Han, Xinyang Ma, Zongrui Li, Tian Cai, Jing Building reliable radiomic models using image perturbation |
title | Building reliable radiomic models using image perturbation |
title_full | Building reliable radiomic models using image perturbation |
title_fullStr | Building reliable radiomic models using image perturbation |
title_full_unstemmed | Building reliable radiomic models using image perturbation |
title_short | Building reliable radiomic models using image perturbation |
title_sort | building reliable radiomic models using image perturbation |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9203573/ https://www.ncbi.nlm.nih.gov/pubmed/35710850 http://dx.doi.org/10.1038/s41598-022-14178-x |
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