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Image resampling and discretization effect on the estimate of myocardial radiomic features from T1 and T2 mapping in hypertrophic cardiomyopathy

Radiomics is emerging as a promising and useful tool in cardiac magnetic resonance (CMR) imaging applications. Accordingly, the purpose of this study was to investigate, for the first time, the effect of image resampling/discretization and filtering on radiomic features estimation from quantitative...

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Autores principales: Marfisi, Daniela, Tessa, Carlo, Marzi, Chiara, Del Meglio, Jacopo, Linsalata, Stefania, Borgheresi, Rita, Lilli, Alessio, Lazzarini, Riccardo, Salvatori, Luca, Vignali, Claudio, Barucci, Andrea, Mascalchi, Mario, Casolo, Giancarlo, Diciotti, Stefano, Traino, Antonio Claudio, Giannelli, Marco
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9205876/
https://www.ncbi.nlm.nih.gov/pubmed/35715531
http://dx.doi.org/10.1038/s41598-022-13937-0
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author Marfisi, Daniela
Tessa, Carlo
Marzi, Chiara
Del Meglio, Jacopo
Linsalata, Stefania
Borgheresi, Rita
Lilli, Alessio
Lazzarini, Riccardo
Salvatori, Luca
Vignali, Claudio
Barucci, Andrea
Mascalchi, Mario
Casolo, Giancarlo
Diciotti, Stefano
Traino, Antonio Claudio
Giannelli, Marco
author_facet Marfisi, Daniela
Tessa, Carlo
Marzi, Chiara
Del Meglio, Jacopo
Linsalata, Stefania
Borgheresi, Rita
Lilli, Alessio
Lazzarini, Riccardo
Salvatori, Luca
Vignali, Claudio
Barucci, Andrea
Mascalchi, Mario
Casolo, Giancarlo
Diciotti, Stefano
Traino, Antonio Claudio
Giannelli, Marco
author_sort Marfisi, Daniela
collection PubMed
description Radiomics is emerging as a promising and useful tool in cardiac magnetic resonance (CMR) imaging applications. Accordingly, the purpose of this study was to investigate, for the first time, the effect of image resampling/discretization and filtering on radiomic features estimation from quantitative CMR T1 and T2 mapping. Specifically, T1 and T2 maps of 26 patients with hypertrophic cardiomyopathy (HCM) were used to estimate 98 radiomic features for 7 different resampling voxel sizes (at fixed bin width), 9 different bin widths (at fixed resampling voxel size), and 7 different spatial filters (at fixed resampling voxel size/bin width). While we found a remarkable dependence of myocardial radiomic features from T1 and T2 mapping on image filters, many radiomic features showed a limited sensitivity to resampling voxel size/bin width, in terms of intraclass correlation coefficient (> 0.75) and coefficient of variation (< 30%). The estimate of most textural radiomic features showed a linear significant (p < 0.05) correlation with resampling voxel size/bin width. Overall, radiomic features from T2 maps have proven to be less sensitive to image preprocessing than those from T1 maps, especially when varying bin width. Our results might corroborate the potential of radiomics from T1/T2 mapping in HCM and hopefully in other myocardial diseases.
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spelling pubmed-92058762022-06-19 Image resampling and discretization effect on the estimate of myocardial radiomic features from T1 and T2 mapping in hypertrophic cardiomyopathy Marfisi, Daniela Tessa, Carlo Marzi, Chiara Del Meglio, Jacopo Linsalata, Stefania Borgheresi, Rita Lilli, Alessio Lazzarini, Riccardo Salvatori, Luca Vignali, Claudio Barucci, Andrea Mascalchi, Mario Casolo, Giancarlo Diciotti, Stefano Traino, Antonio Claudio Giannelli, Marco Sci Rep Article Radiomics is emerging as a promising and useful tool in cardiac magnetic resonance (CMR) imaging applications. Accordingly, the purpose of this study was to investigate, for the first time, the effect of image resampling/discretization and filtering on radiomic features estimation from quantitative CMR T1 and T2 mapping. Specifically, T1 and T2 maps of 26 patients with hypertrophic cardiomyopathy (HCM) were used to estimate 98 radiomic features for 7 different resampling voxel sizes (at fixed bin width), 9 different bin widths (at fixed resampling voxel size), and 7 different spatial filters (at fixed resampling voxel size/bin width). While we found a remarkable dependence of myocardial radiomic features from T1 and T2 mapping on image filters, many radiomic features showed a limited sensitivity to resampling voxel size/bin width, in terms of intraclass correlation coefficient (> 0.75) and coefficient of variation (< 30%). The estimate of most textural radiomic features showed a linear significant (p < 0.05) correlation with resampling voxel size/bin width. Overall, radiomic features from T2 maps have proven to be less sensitive to image preprocessing than those from T1 maps, especially when varying bin width. Our results might corroborate the potential of radiomics from T1/T2 mapping in HCM and hopefully in other myocardial diseases. Nature Publishing Group UK 2022-06-17 /pmc/articles/PMC9205876/ /pubmed/35715531 http://dx.doi.org/10.1038/s41598-022-13937-0 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Marfisi, Daniela
Tessa, Carlo
Marzi, Chiara
Del Meglio, Jacopo
Linsalata, Stefania
Borgheresi, Rita
Lilli, Alessio
Lazzarini, Riccardo
Salvatori, Luca
Vignali, Claudio
Barucci, Andrea
Mascalchi, Mario
Casolo, Giancarlo
Diciotti, Stefano
Traino, Antonio Claudio
Giannelli, Marco
Image resampling and discretization effect on the estimate of myocardial radiomic features from T1 and T2 mapping in hypertrophic cardiomyopathy
title Image resampling and discretization effect on the estimate of myocardial radiomic features from T1 and T2 mapping in hypertrophic cardiomyopathy
title_full Image resampling and discretization effect on the estimate of myocardial radiomic features from T1 and T2 mapping in hypertrophic cardiomyopathy
title_fullStr Image resampling and discretization effect on the estimate of myocardial radiomic features from T1 and T2 mapping in hypertrophic cardiomyopathy
title_full_unstemmed Image resampling and discretization effect on the estimate of myocardial radiomic features from T1 and T2 mapping in hypertrophic cardiomyopathy
title_short Image resampling and discretization effect on the estimate of myocardial radiomic features from T1 and T2 mapping in hypertrophic cardiomyopathy
title_sort image resampling and discretization effect on the estimate of myocardial radiomic features from t1 and t2 mapping in hypertrophic cardiomyopathy
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9205876/
https://www.ncbi.nlm.nih.gov/pubmed/35715531
http://dx.doi.org/10.1038/s41598-022-13937-0
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